RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 UTP20O75691 2785 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 PTPN13Q12923 2485 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 DAPL1A0PJW8 107 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 B9A039 149 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 SMPD2O60906 423 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 NGFP01138 241 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 RAF1P04049 648 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 DBTP11182 482 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 OPRL1P41146 370 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 EVX1P49640 407 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 CXCR4P61073 352 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 ROM1Q03395 351 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF91Q05481 1191 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 EGR3Q06889 387 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 RAB40BQ12829 278 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 MALLQ13021 153 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 ADIPOQQ15848 244 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 KRTAP27-1Q3LI81 207 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF322Q6U7Q0 402 aaPredicted RBP10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 PLEKHG7Q6ZR37 379 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 KCTD20Q7Z5Y7 419 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF679Q8IYX0 411 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 ACBD7Q8N6N7 88 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 CNIH3Q8TBE1 160 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 SYNPRQ8TBG9 265 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 SNX33Q8WV41 574 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 APH1BQ8WW43 257 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 LGALS12Q96DT0 336 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 OR8B4Q96RC9 309 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 AMELYQ99218 206 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 TBX5Q99593 518 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 C1QTNF5Q9BXJ0 243 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 PLK3Q9H4B4 646 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 CBLN4Q9NTU7 201 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 SLCO1C1Q9NYB5 712 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 DUSP13Q9UII6 198 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 LAMP3Q9UQV4 416 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 KLHDC2Q9Y2U9 406 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 STARD10Q9Y365 291 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 N6AMT1Q9Y5N5 214 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 PMF1-BGLAPU3KQ54 211 aa10.26□□□□□ -0.77
SPTLC1-202ENST00000337841 ADGRG4Q8IZF6 3080 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 A0A1W2PQL4 384 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 ACOD1A6NK06 481 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 H3BSA7 217 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 GPRIN2O60269 458 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 APOL3O95236 402 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 ATE1O95260 518 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 KRT8P05787 483 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 ANXA2P07355 339 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 TACSTD2P09758 323 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 DANCRP0C864 163 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 MYF6P23409 242 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 OTX1P32242 354 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 DCTDP32321 178 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 CX3CR1P49238 355 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 RIDAP52758 137 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 MED21Q13503 144 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 EFNB3Q15768 340 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 SMN1Q16637 294 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 PAMR1Q6UXH9 720 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 LRRN1Q6UXK5 716 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 COLCA1Q6ZS62 124 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 NAA40Q86UY6 237 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 EGFL6Q8IUX8 553 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF101Q8IZC7 436 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 SLC25A40Q8TBP6 338 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 MRPL24Q96A35 216 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF184Q99676 751 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 CCL19Q99731 98 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 LIME1Q9H400 295 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 INPP5EQ9NRR6 644 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 PLCXD1Q9NUJ7 323 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 CHCHD3Q9NX63 227 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 SCN3BQ9NY72 215 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 ST6GALNAC2Q9UJ37 374 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 COPS3Q9UNS2 423 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 PRR14LQ5THK1 2151 aa10.25□□□□□ -0.77
SPTLC1-202ENST00000337841 EFCAB10A6NFE3 127 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 METTL15A6NJ78 407 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 J3QRE1 110 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 FAM20BO75063 409 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 SULT1C4O75897 302 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 SOD3P08294 240 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF250P15622 560 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 DCKP27707 260 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 KLF3P57682 345 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 SNRPD2P62316 118 aaKnown RBP10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 C6orf141Q5SZD1 244 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 RFPL4BQ6ZWI9 263 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 DTX2Q86UW9 622 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 YIPF7Q8N8F6 280 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 BPIFB6Q8NFQ5 453 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 OR52H1Q8NGJ2 320 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 OR52I1Q8NGK6 324 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 KLF14Q8TD94 323 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 FBLIM1Q8WUP2 373 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 NRGNQ92686 78 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 NINJ1Q92982 152 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms