RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ANKRD16Q6P6B7 361 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ETV3LQ6ZN32 361 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 SNX22Q96L94 193 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 LAMP3Q9UQV4 416 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 B3GALT5Q9Y2C3 310 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 COL24A1Q17RW2 1714 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 SLC17A2O00624 439 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 MSTNO14793 375 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 CD160O95971 181 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 POU3F1Q03052 451 aaPredicted RBP12□□□□□ -0.49
COL2A1-201ENST00000337299 CCINQ13939 588 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 SP6Q3SY56 376 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF793Q6ZN11 406 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 USP53Q70EK8 1073 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 C2orf50Q96LR7 162 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 TXN2Q99757 166 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ARHGDIGQ99819 225 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 VPS25Q9BRG1 176 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 BCO1Q9HAY6 547 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 BRWD3Q6RI45 1802 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 A0A1W2PPQ1 181 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 MPTX1A8MV57 137 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 CTDSPLO15194 276 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ID4P47928 161 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ZXDCQ2QGD7 858 aaPredicted RBP12□□□□□ -0.49
COL2A1-201ENST00000337299 SLC35D3Q5M8T2 416 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 KIRREL2Q6UWL6 708 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF765Q7L2R6 523 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 SLC22A24Q8N4F4 322 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 COMMD1Q8N668 190 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 SLC25A28Q96A46 364 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 CCDC74AQ96AQ1 378 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
COL2A1-201ENST00000337299 LYSMD1Q96S90 227 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 NKX2-4Q9H2Z4 354 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 OR52A1Q9UKL2 312 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 TNFSF18Q9UNG2 199 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 PRAMEF27A3QJZ7 478 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 SULT2B1O00204 365 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 TAAR5O14804 337 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 F10P00742 488 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 SERPINA7P05543 415 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 RCC1P18754 421 aaPredicted RBP11.99□□□□□ -0.49
COL2A1-201ENST00000337299 BTCP35070 178 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 LIMS1P48059 325 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 RUNX3Q13761 415 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 WBP2NLQ6ICG8 309 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 HTR3DQ70Z44 454 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 DCXRQ7Z4W1 244 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 TMEM229BQ8NBD8 167 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 CPNE4Q96A23 557 aaPredicted RBP11.99□□□□□ -0.49
COL2A1-201ENST00000337299 AP1S3Q96PC3 154 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 IL17BQ9UHF5 180 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 LY75O60449 1722 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 GPR37O15354 613 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 HPNP05981 417 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 TAS2R46P59540 309 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 OR13C8Q8NGS7 320 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 MAGT1Q9H0U3 335 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 FBXL17Q9UF56 701 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 SCN2AQ99250 2005 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 CRHP06850 196 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 PCP4P48539 62 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 RBP2P50120 134 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 DUSP8Q13202 625 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF74Q16587 644 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 SLC25A30Q5SVS4 291 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 BATF2Q8N1L9 274 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 OR51A4Q8NGJ6 313 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 OR14L1PQ8NHC6 308 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 FAM174AQ8TBP5 190 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 ASB17Q8WXJ9 295 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 MRPL38Q96DV4 380 aaKnown RBP11.99□□□□□ -0.49
COL2A1-201ENST00000337299 SPIN2AQ99865 258 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 SPIN2BQ9BPZ2 258 aa11.99□□□□□ -0.49
COL2A1-201ENST00000337299 COA3Q9Y2R0 106 aaPredicted RBP11.99□□□□□ -0.49
COL2A1-201ENST00000337299 SERINC4A6NH21 518 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 A6NIZ1 184 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 RAP1BP61224 184 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 VWA2Q5GFL6 755 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 ALKBH2Q6NS38 261 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 LMF2Q9BU23 707 aaKnown RBP11.98□□□□□ -0.49
COL2A1-201ENST00000337299 LAT2Q9GZY6 243 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 PIPOXQ9P0Z9 390 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 AHCTF1Q8WYP5 2266 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.98□□□□□ -0.49
COL2A1-201ENST00000337299 H7BYZ3 331 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 HNRNPA1P09651 372 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL2A1-201ENST00000337299 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
COL2A1-201ENST00000337299 OPRM1P35372 400 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 RNF4P78317 190 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 COL19A1Q14993 1142 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 PRSS53Q2L4Q9 553 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 ARHGAP11BQ3KRB8 267 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF776Q68DI1 518 aaPredicted RBP11.98□□□□□ -0.49
COL2A1-201ENST00000337299 FAM57BQ71RH2 274 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 PRR18Q8N4B5 295 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 SERINC1Q9NRX5 453 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms