RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 C11orf88Q6PI97 169 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 MUC20Q8N307 709 aaPredicted RBP7.84□□□□□ -1.15
SNCA-201ENST00000336904 NOXO1Q8NFA2 376 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 OR8B12Q8NGG6 310 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 OR2AJ1Q8NGZ0 328 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 HYLS1Q96M11 299 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 SLA2Q9H6Q3 261 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 CYB5R1Q9UHQ9 305 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 DKKL1Q9UK85 242 aa7.84□□□□□ -1.15
SNCA-201ENST00000336904 A6NIZ1 184 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 H7C417 338 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 TNFRSF10AO00220 468 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 ZNF205O95201 554 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 IGHG1P01857 330 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 H2BFSP57053 126 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 RAP1BP61224 184 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 RAP1AP62834 184 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 Q0VFX4 171 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 UNC119Q13432 240 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 CD276Q5ZPR3 534 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 GLT8D1Q68CQ7 371 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 AWAT2Q6E213 333 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 MISPQ8IVT2 679 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 C1orf210Q8IVY1 113 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 OR2AE1Q8NHA4 323 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 ELP5Q8TE02 316 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 RNF133Q8WVZ7 376 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 PHYHIPQ92561 330 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 NAT6Q93015 286 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 SEH1LQ96EE3 360 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 MRGPRX4Q96LA9 322 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 ALKBH3Q96Q83 286 aaPredicted RBP7.84□□□□□ -1.16
SNCA-201ENST00000336904 HES7Q9BYE0 225 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 SELENOIQ9C0D9 397 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 C1orf198Q9H425 327 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 NIPAL2Q9H841 368 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 PROK2Q9HC23 129 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 MTFP1Q9UDX5 166 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 C19orf25Q9UFG5 118 aaPredicted RBP7.84□□□□□ -1.16
SNCA-201ENST00000336904 B3GALT5Q9Y2C3 310 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 SVILO95425 2214 aa7.84□□□□□ -1.16
SNCA-201ENST00000336904 GVINP1Q7Z2Y8 2422 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 FXYD6-FXYD2A0A087WZ82 144 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 C9J4A7 227 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 CTDSPLO15194 276 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ARPC5O15511 151 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ICMTO60725 284 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 IGHMP01871 453 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 RAF1P04049 648 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 PI3P19957 117 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 NTF4P34130 210 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 CX3CR1P49238 355 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 MAP2K6P52564 334 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 SRYQ05066 204 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ANGPT1Q15389 498 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 TIGD3Q6B0B8 471 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 STEAP1BQ6NZ63 245 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 TMEM81Q6P7N7 255 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 DNM1P34Q6PK57 102 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 IDO2Q6ZQW0 420 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 TIPARPQ7Z3E1 657 aaKnown RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 TNFAIP8L1Q8WVP5 186 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ELMOD3Q96FG2 381 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 MRPL13Q9BYD1 178 aaKnown RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 SRXN1Q9BYN0 137 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 FXYD6Q9H0Q3 95 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 POFUT1Q9H488 388 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ELL3Q9HB65 397 aaPredicted RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 HPF1Q9NWY4 346 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 MEIKINA0A087WXM9 373 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 TOX3O15405 576 aaPredicted RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 SCO1O75880 301 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 STK17BO94768 372 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ZNF432O94892 652 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 MPIG6BO95866 241 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 HCKP08631 526 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 GRK1Q15835 563 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 CDNFQ49AH0 187 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 BEX5Q5H9J7 111 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 WIPI1Q5MNZ9 446 aaPredicted RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 RPS19BP1Q86WX3 136 aaKnown RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 ANGPTL5Q86XS5 388 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 GABRG1Q8N1C3 465 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 PAQR4Q8N4S7 273 aaPredicted RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 TTC9Q92623 222 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 SEC22AQ96IW7 307 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 GPER1Q99527 375 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ZNF275Q9NSD4 429 aaPredicted RBP7.83□□□□□ -1.16
SNCA-201ENST00000336904 ZNF581Q9P0T4 197 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 ETV7Q9Y603 341 aa7.83□□□□□ -1.16
SNCA-201ENST00000336904 A0A0J9YW62 118 aa7.82□□□□□ -1.16
SNCA-201ENST00000336904 NDUFB6O95139 128 aa7.82□□□□□ -1.16
SNCA-201ENST00000336904 RAB3DO95716 219 aa7.82□□□□□ -1.16
SNCA-201ENST00000336904 ECDO95905 644 aaPredicted RBP7.82□□□□□ -1.16
SNCA-201ENST00000336904 ZNF20P17024 532 aa7.82□□□□□ -1.16
SNCA-201ENST00000336904 IGFBP3P17936 291 aaPredicted RBP7.82□□□□□ -1.16
SNCA-201ENST00000336904 LCN1P31025 176 aa7.82□□□□□ -1.16
SNCA-201ENST00000336904 AP3S2P59780 193 aa7.82□□□□□ -1.16
SNCA-201ENST00000336904 GABREP78334 506 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms