RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 EHFQ9NZC4 300 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 YKT6O15498 198 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ZNF217O75362 1048 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 STK17BO94768 372 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 WNT11O96014 354 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SERPINA5P05154 406 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ALOX5APP20292 161 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 MAP2K6P52564 334 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SEC61A1P61619 476 aaKnown RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 ELAVL1Q15717 326 aaKnown RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 GUSBP11Q6P575 273 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 TMUB2Q71RG4 321 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 FJX1Q86VR8 437 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ZFP82Q8N141 532 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SYS1Q8N2H4 156 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 GTPBP8Q8N3Z3 284 aaPredicted RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 FAM71CQ8NEG0 241 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OR2AK2Q8NG84 335 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OR5D14Q8NGL3 314 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 TMED6Q8WW62 240 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 HAVCR1Q96D42 359 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ZNF845Q96IR2 970 aaPredicted RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 JAM3Q9BX67 310 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 GPR84Q9NQS5 396 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 PLEKHJ1Q9NW61 149 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 HS3ST3A1Q9Y663 406 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 H7C2Y5 167 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 M0R036 132 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SIGLEC6O43699 453 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 QDPRP09417 244 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 CSF1P09603 554 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OR4E1P0C645 316 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 FCGR2AP12318 317 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 CBR1P16152 277 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 PNLIPP16233 465 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 RAB3AP20336 220 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 LAP3P28838 519 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 RBM34P42696 430 aaKnown RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 POLR2HP52434 150 aaKnown RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 SLC37A1P57057 533 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 HSF1Q00613 529 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 TLE1Q04724 770 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 C19orf57Q0VDD7 668 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 MGAT2Q10469 447 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 EBPQ15125 230 aaKnown RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 C2orf68Q2NKX9 166 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 GPR139Q6DWJ6 353 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 CD200R1LQ6Q8B3 271 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OR4K15Q8NH41 348 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OR2AE1Q8NHA4 323 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OTOSQ8NHW6 89 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 PPP1R1CQ8WVI7 109 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SLAMF6Q96DU3 332 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SLC25A38Q96DW6 304 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 TM4SF19Q96DZ7 209 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ADAT1Q9BUB4 502 aaKnown RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 ZFHX4Q86UP3 3567 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 LOC100289279A0A1B0GTE1 492 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 LEUTXA8MZ59 168 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 F8W036 122 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 SGCEO43556 437 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 IL33O95760 270 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 S100A6P06703 90 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 DUSP1P28562 367 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 CXCL12P48061 93 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 BTG1P62324 171 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 RNF4P78317 190 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 BLOC1S1P78537 153 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 GK2Q14410 553 aaPredicted RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 TAF9Q16594 264 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 SP6Q3SY56 376 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 PHLDA2Q53GA4 152 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 FAM209BQ5JX69 171 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 LAMTOR1Q6IAA8 161 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 C7orf50Q9BRJ6 194 aaKnown RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 C20orf24Q9BUV8 137 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 GHITMQ9H3K2 345 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 C1orf198Q9H425 327 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 ZNF442Q9H7R0 627 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 A0A1B0GX78 115 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 CTAG2O75638 210 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 PPP3CBP16298 524 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 CD27P26842 260 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 BDKRB2P30411 391 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 THBS2P35442 1172 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 TAS2R19P59542 299 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 RAP2BP61225 183 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 RPS18P62269 152 aaKnown RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 EGR4Q05215 589 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 SMCO1Q147U7 214 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 PTCRAQ6ISU1 281 aaPredicted RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 CPEB2Q7Z5Q1 589 aaKnown RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 NAA40Q86UY6 237 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 PPP1R3BQ86XI6 285 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 C9orf40Q8IXQ3 194 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 OR5H2Q8NGV7 314 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 PIGCQ92535 297 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 HLA-CQ95604 372 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 DDIT4LQ96D03 193 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms