RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 SPOCK3Q9BQ16 436 aa13.09□□□□□ -0.31
CMC1-201ENST00000334841 CDH20Q9HBT6 801 aa13.09□□□□□ -0.31
CMC1-201ENST00000334841 CHCHD3Q9NX63 227 aaKnown RBP13.09□□□□□ -0.31
CMC1-201ENST00000334841 LSM2Q9Y333 95 aaKnown RBP13.09□□□□□ -0.31
CMC1-201ENST00000334841 CAB39Q9Y376 341 aaPredicted RBP13.09□□□□□ -0.31
CMC1-201ENST00000334841 C5orf63A6NC05 138 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 ABCD4O14678 606 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 MRPS14O60783 128 aaKnown RBP13.08□□□□□ -0.32
CMC1-201ENST00000334841 PTAFRP25105 342 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 DCTDP32321 178 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 PSMB10P40306 273 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 MAP2K4P45985 399 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 ZNF121P58317 390 aaPredicted RBP13.08□□□□□ -0.32
CMC1-201ENST00000334841 TBCEQ15813 527 aaPredicted RBP13.08□□□□□ -0.32
CMC1-201ENST00000334841 BEX5Q5H9J7 111 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 RFPL4BQ6ZWI9 263 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 PRSS45Q7RTY3 260 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 NAA40Q86UY6 237 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.08□□□□□ -0.32
CMC1-201ENST00000334841 ZNF101Q8IZC7 436 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 NANOGP1Q8N7R0 232 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 OR1J2Q8NGS2 313 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 MRPL48Q96GC5 212 aaKnown RBP13.08□□□□□ -0.32
CMC1-201ENST00000334841 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 DCLRE1CQ96SD1 692 aaKnown RBP13.08□□□□□ -0.32
CMC1-201ENST00000334841 MND1Q9BWT6 205 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 ESRP2Q9H6T0 727 aaKnown RBP13.08□□□□□ -0.32
CMC1-201ENST00000334841 NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 FAM206AQ9NX38 181 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 GRIP1Q9Y3R0 1128 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 ADGRG4Q8IZF6 3080 aa13.08□□□□□ -0.32
CMC1-201ENST00000334841 E9PI62 339 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 CASKO14936 926 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 ICMTO60725 284 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 SMPD2O60906 423 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 RPP14O95059 124 aaKnown RBP13.07□□□□□ -0.32
CMC1-201ENST00000334841 PNPP00491 289 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 LALBAP00709 142 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 CRYAAP02489 173 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 MT-ND5P03915 603 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 SLC2A1P11166 492 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 SLC6A9P48067 706 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 TPTEP56180 551 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 WNT4P56705 351 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 ADAM5Q6NVV9 412 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 DRAM2Q6UX65 266 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 TMPRSS11AQ6ZMR5 421 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 KCTD20Q7Z5Y7 419 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 SPARTQ8N0X7 666 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 GATAD2BQ8WXI9 593 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 RORBQ92753 470 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 C4orf45Q96LM5 186 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 OR5M11Q96RB7 305 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 ERGIC3Q9Y282 383 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 R4GMQ9 66 aa13.07□□□□□ -0.32
CMC1-201ENST00000334841 NGFP01138 241 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 TACSTD2P09758 323 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 FAM157BP0CG42 384 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 SMIM18P0DKX4 95 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 PCMT1P22061 227 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 EMX1Q04741 257 aaPredicted RBP13.06□□□□□ -0.32
CMC1-201ENST00000334841 ZNF829Q3KNS6 432 aaPredicted RBP13.06□□□□□ -0.32
CMC1-201ENST00000334841 SNAI3Q3KNW1 292 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 COLCA1Q6ZS62 124 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 KLBQ86Z14 1044 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 KBTBD8Q8NFY9 601 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 TSPAN14Q8NG11 270 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 PIK3IP1Q96FE7 263 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 MYCBPQ99417 103 aaPredicted RBP13.06□□□□□ -0.32
CMC1-201ENST00000334841 C1QTNF5Q9BXJ0 243 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 OR51B6Q9H340 312 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 BRD7Q9NPI1 651 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 ACOT13Q9NPJ3 140 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 KCNN3Q9UGI6 736 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 SNX5Q9Y5X3 404 aa13.06□□□□□ -0.32
CMC1-201ENST00000334841 HELZ2Q9BYK8 2649 aaKnown RBP13.06□□□□□ -0.32
CMC1-201ENST00000334841 LRRK2Q5S007 2527 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 GCN1Q92616 2671 aaKnown RBP13.05□□□□□ -0.32
CMC1-201ENST00000334841 TMEM269A0A1B0GVZ9 245 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 SHISA9B4DS77 424 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 LOC110117498-PIK3R3F6TDL0 507 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 APOC1P02654 83 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 LCKP06239 509 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 ANXA2P07355 339 aaKnown RBP13.05□□□□□ -0.32
CMC1-201ENST00000334841 CD3EP07766 207 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 PCSK6P29122 969 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 MMP16P51512 607 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 GTF2A1P52655 376 aaPredicted RBP13.05□□□□□ -0.32
CMC1-201ENST00000334841 NR1H2P55055 460 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 NANOS3P60323 173 aaKnown RBP13.05□□□□□ -0.32
CMC1-201ENST00000334841 ERVS71-1P61550 626 aa13.05□□□□□ -0.32
CMC1-201ENST00000334841 NKX6-1P78426 367 aaPredicted RBP13.05□□□□□ -0.32
CMC1-201ENST00000334841 SNTB2Q13425 540 aaKnown RBP13.05□□□□□ -0.32
CMC1-201ENST00000334841 DAZAP2Q15038 168 aaPredicted RBP13.05□□□□□ -0.32
CMC1-201ENST00000334841 WDR38Q5JTN6 314 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms