RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FXYD4P59646 89 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 EEF1A1P68104 462 aaKnown RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 LINC00303Q3SY05 128 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 GLYATL3Q5SZD4 288 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TMPRSS7Q7RTY8 843 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 CMC2Q9NRP2 79 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF337Q9Y3M9 751 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 U3KQA8 63 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TNFSF12O43508 249 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 DPM1O60762 260 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 CRTAPO75718 401 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TGM6O95932 706 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 IRF3Q14653 427 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 PLEKHN1Q494U1 663 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 LSMEM1Q8N8F7 131 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 OR8D4Q8NGM9 314 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF721Q8TF20 911 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 WDR77Q9BQA1 342 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 FAM173AQ9BQD7 235 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 CGGBP1Q9UFW8 167 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 HHLA2Q9UM44 414 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 RHBDD3Q9Y3P4 386 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TAS2R20P59543 309 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 HERV-K104P61576 105 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 FXNQ16595 210 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 CLLU1Q5K131 121 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 C5orf46Q6UWT4 87 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 ISYNA1Q9NPH2 558 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 KCNJ16Q9NPI9 418 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TMEM269A0A1B0GVZ9 245 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 A8MVM7 634 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 DVL2O14641 736 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 CELA2AP08217 269 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 GABRA4P48169 554 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 RBM39Q14498 530 aaKnown RBP10.61□□□□□ -0.71
HDAC6-201ENST00000334136 C9orf40Q8IXQ3 194 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF679Q8IYX0 411 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 GPR137CQ8N3F9 429 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 TCTEX1D2Q8WW35 142 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 NKX6-2Q9C056 277 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SELENOIQ9C0D9 397 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 DNTTIP1Q9H147 329 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SLC25A19Q9HC21 320 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 WIF1Q9Y5W5 379 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 IGHV1-45A0A0A0MS14 117 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 OR5H15A6NDH6 313 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 IFITM5A6NNB3 132 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 E9PI62 339 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 ADRB1P08588 477 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 BDKRB2P30411 391 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 CAV2P51636 162 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SNU13P55769 128 aaKnown RBP10.61□□□□□ -0.71
HDAC6-201ENST00000334136 FAM189A2Q15884 450 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 MEP1BQ16820 701 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 TMEM201Q5SNT2 666 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 C3orf33Q6P1S2 294 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 MARC2Q969Z3 335 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 FAM3DQ96BQ1 224 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 GNRHR2Q96P88 292 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 LAMA3Q16787 3333 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 COL6A6A6NMZ7 2263 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 APOBEC1P41238 236 aaKnown RBP10.61□□□□□ -0.71
HDAC6-201ENST00000334136 GLP1RP43220 463 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 CARD18P57730 90 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 GLO1Q04760 184 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SFRP5Q5T4F7 317 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 ATP1A1-AS1Q5TC04 95 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SPINK14Q6IE38 97 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 DUSP18Q8NEJ0 188 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 C17orf47Q8NEP4 570 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SLC25A43Q8WUT9 341 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SLC26A1Q9H2B4 701 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 ANKRD19PQ9H560 264 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 SEMA5BQ9P283 1151 aa10.61□□□□□ -0.71
HDAC6-201ENST00000334136 ING1Q9UK53 422 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-201ENST00000334136 LANCL1O43813 399 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CT45A8P0DMV1 189 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CT45A9P0DMV2 189 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CCNOP22674 350 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 SLC6A1P30531 599 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 EIF2S3P41091 472 aaKnown RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF84P51523 738 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ALKBH1Q13686 389 aaKnown RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 GNMTQ14749 295 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CT45A2Q5DJT8 189 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 OR10K2Q6IF99 312 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 GLRX5Q86SX6 157 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 OR4D11Q8NGI4 311 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 TMED6Q8WW62 240 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ST8SIA1Q92185 356 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ARPC5LQ9BPX5 153 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 POFUT1Q9H488 388 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 NIT2Q9NQR4 276 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CHRNA9Q9UGM1 479 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 GNRHRP30968 328 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CDK5Q00535 292 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 PPP1R32Q7Z5V6 425 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms