RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 GLO1Q04760 184 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 ZP2Q05996 745 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 SGCBQ16585 318 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 NUP54Q7Z3B4 507 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 OR13H1Q8NG92 308 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 RRNAD1Q96FB5 475 aaKnown RBP21.12■□□□□ 0.97
TSKU-201ENST00000333090 CMSS1Q9BQ75 279 aaKnown RBP21.12■□□□□ 0.97
TSKU-201ENST00000333090 NRSN2Q9GZP1 204 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 COA4Q9NYJ1 87 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 RAB22AQ9UL26 194 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 P2RY10O00398 339 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 SNAPINO95295 136 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 GNB3P16520 340 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 DCDP81605 110 aaKnown RBP21.12■□□□□ 0.97
TSKU-201ENST00000333090 C1orf61Q13536 156 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 LINC00346Q8IVM7 164 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 SLC30A7Q8NEW0 376 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 OR10R2Q8NGX6 335 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 MARCH1Q8TCQ1 289 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 PTX4Q96A99 478 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 LAT2Q9GZY6 243 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 FN3KRPQ9HA64 309 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 TNFP01375 233 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 PMP2P02689 132 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 SPP1P10451 314 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 HSD17B7P56937 341 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 SLC37A1P57057 533 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 MICBQ29980 383 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 ZFP82Q8N141 532 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 KDM8Q8N371 416 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 PAQR4Q8N4S7 273 aaPredicted RBP21.11■□□□□ 0.97
TSKU-201ENST00000333090 LILRB1Q8NHL6 650 aaPredicted RBP21.11■□□□□ 0.97
TSKU-201ENST00000333090 GPBAR1Q8TDU6 330 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 CPNE2Q96FN4 548 aaPredicted RBP21.11■□□□□ 0.97
TSKU-201ENST00000333090 TXNIPQ9H3M7 391 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 G6PC2Q9NQR9 355 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 TMEM100Q9NV29 134 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 VSX1Q9NZR4 365 aaPredicted RBP21.11■□□□□ 0.97
TSKU-201ENST00000333090 SEC16AO15027 2179 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 TMEM269A0A1B0GVZ9 245 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 LOC390937A0A1W2PQ73 354 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 NSA2O95478 260 aaKnown RBP21.11■□□□□ 0.97
TSKU-201ENST00000333090 RAB6AP20340 208 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 GNALP38405 381 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 UNC119Q13432 240 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 C10orf91Q5T1B1 145 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 FAHD2BQ6P2I3 314 aaPredicted RBP21.11■□□□□ 0.97
TSKU-201ENST00000333090 RTN4RL2Q86UN3 420 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 NKAIN3Q8N8D7 197 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 ZSCAN4Q8NAM6 433 aaPredicted RBP21.11■□□□□ 0.97
TSKU-201ENST00000333090 ROBO4Q8WZ75 1007 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 FAHD2AQ96GK7 314 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 CTSFQ9UBX1 484 aa21.11■□□□□ 0.97
TSKU-201ENST00000333090 ATG2AQ2TAZ0 1938 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 KIR2DS5A0A0G2JLQ3 304 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 A0A0G2JNG1 304 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 KIR2DS3K7RE56 304 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 SLC6A8P48029 635 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 DLX2Q07687 328 aaPredicted RBP21.1■□□□□ 0.97
TSKU-201ENST00000333090 KIR2DS5Q14953 304 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 DCXRQ7Z4W1 244 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 OR1M1Q8NGA1 313 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 RNF126Q9BV68 326 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 UQCC1Q9NVA1 299 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 FAM96BQ9Y3D0 163 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 TDRD6O60522 2096 aaKnown RBP21.1■□□□□ 0.97
TSKU-201ENST00000333090 ZNF705EA8MWA4 302 aaPredicted RBP21.1■□□□□ 0.97
TSKU-201ENST00000333090 SRSF10O75494 262 aaKnown RBP21.1■□□□□ 0.97
TSKU-201ENST00000333090 KCNJ3P48549 501 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 PTPMT1Q8WUK0 201 aaPredicted RBP21.1■□□□□ 0.97
TSKU-201ENST00000333090 FGGYQ96C11 551 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 ZC3H10Q96K80 434 aaKnown RBP21.1■□□□□ 0.97
TSKU-201ENST00000333090 ZFP57Q9NU63 452 aa21.1■□□□□ 0.97
TSKU-201ENST00000333090 ARID1AO14497 2285 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 BLACEA4D250 179 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 FARS2O95363 451 aaKnown RBP21.09■□□□□ 0.97
TSKU-201ENST00000333090 CRYBA1P05813 215 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 MPZP25189 248 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 NFYBP25208 207 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 SHHQ15465 462 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 SLC22A18ASQ8N1D0 253 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 OR52N4Q8NGI2 321 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 CYTL1Q9NRR1 136 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 CFAP54Q96N23 3096 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 PDZK1IP1Q13113 114 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 LYPD6Q86Y78 171 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 GLYATL2Q8WU03 294 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 MRGPRX1Q96LB2 322 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 HRH4Q9H3N8 390 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 MMP26Q9NRE1 261 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 CENPMQ9NSP4 180 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 RHBDD3Q9Y3P4 386 aa21.09■□□□□ 0.97
TSKU-201ENST00000333090 DBX1A6NMT0 343 aa21.08■□□□□ 0.97
TSKU-201ENST00000333090 H0YIZ8 118 aa21.08■□□□□ 0.97
TSKU-201ENST00000333090 OR2T1O43869 369 aa21.08■□□□□ 0.97
TSKU-201ENST00000333090 ZNF823P16415 610 aa21.08■□□□□ 0.97
TSKU-201ENST00000333090 AKT2P31751 481 aa21.08■□□□□ 0.97
TSKU-201ENST00000333090 LBX1P52954 281 aa21.08■□□□□ 0.97
TSKU-201ENST00000333090 ADAMTS18Q8TE60 1221 aa21.08■□□□□ 0.97
TSKU-201ENST00000333090 MAP3K3Q99759 626 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms