RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CAMK2AQ9UQM7 478 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 AK6Q9Y3D8 172 aaKnown RBP17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 HSPB11Q9Y547 144 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 FABP7O15540 132 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 GSTZ1O43708 216 aaPredicted RBP17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 ITGB2P05107 769 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 NR2C1P13056 603 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 ZNF133P52736 654 aaPredicted RBP17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 CLDN18P56856 261 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 SNRPD2P62316 118 aaKnown RBP17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 KCNMB1Q16558 191 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 ABLIM2Q6H8Q1 611 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 BAIAP2L2Q6UXY1 529 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 CATSPERDQ86XM0 798 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 C9orf62Q8N4C0 152 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 SNAPC3Q92966 411 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 CPNE4Q96A23 557 aaPredicted RBP17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 CMTM3Q96MX0 182 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 COPZ2Q9P299 210 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 GDF2Q9UK05 429 aaPredicted RBP17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 LOC400499M0QZD8 3231 aa17.92■□□□□ 0.46
RIPPLY3-201ENST00000329553 CTDSPLO15194 276 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 H2BFMP0C1H6 154 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 C10orf128Q5T292 105 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 PDSS1Q5T2R2 415 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 CFAP77Q6ZQR2 320 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 ZNF767PQ75MW2 155 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 OR11H7Q8NGC8 314 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 GPR148Q8TDV2 347 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 C7orf50Q9BRJ6 194 aaKnown RBP17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 POLR1DQ9Y2S0 133 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 EMC9Q9Y3B6 208 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 R4GMQ9 66 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 CUL9Q8IWT3 2517 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 ZNF407Q9C0G0 2248 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 GPR171O14626 319 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 STOMP27105 288 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 TNFSF10P50591 281 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 C20orf196Q8IYI0 205 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 ZFP3Q96NJ6 502 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 SLC25A18Q9H1K4 315 aa17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 PCDHGA9Q9Y5G4 932 aaKnown RBP17.91■□□□□ 0.46
RIPPLY3-201ENST00000329553 GIFP27352 417 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 SGCAQ16586 387 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 DEFB109BQ30KR1 87 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 CD276Q5ZPR3 534 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 FCRLAQ7L513 359 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 OR2AJ1Q8NGZ0 328 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 INTS12Q96CB8 462 aaKnown RBP17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 GFI1Q99684 422 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 ASH2LQ9UBL3 628 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 DNAJC13O75165 2243 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 DHHO43323 396 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 CYTIPO60759 359 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 ZNF708P17019 499 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 MAPK3P27361 379 aaPredicted RBP17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 RAG2P55895 527 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 SLC10A1Q14973 349 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 RNFT1Q5M7Z0 435 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 ABHD3Q8WU67 409 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 PNPLA2Q96AD5 504 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 RBM24Q9BX46 236 aaKnown RBP17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 CACNG6Q9BXT2 260 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 OR51J1Q9H342 316 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 G6PC2Q9NQR9 355 aa17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 MRPS7Q9Y2R9 242 aaKnown RBP17.9■□□□□ 0.46
RIPPLY3-201ENST00000329553 ZFHX4Q86UP3 3567 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 TRBV5-7A0A0A0MS05 114 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 TMEM269A0A1B0GVZ9 245 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 DYRK1AQ13627 763 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 KLF9Q13886 244 aaPredicted RBP17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 UBE2NLQ5JXB2 153 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 TMEM178AQ8NBL3 297 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 SMIM4Q8WVI0 70 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 PHF21AQ96BD5 680 aa17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 ZNF837Q96EG3 531 aaPredicted RBP17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 NCOA6Q14686 2063 aaPredicted RBP17.89■□□□□ 0.45
RIPPLY3-201ENST00000329553 ZNF891A8MT65 544 aaPredicted RBP17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 RER1O15258 196 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 EFSO43281 561 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 DOK2O60496 412 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 RNASE12Q5GAN4 147 aaKnown RBP17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 PLXDC2Q6UX71 529 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 AAED1Q7RTV5 226 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 LGALS14Q8TCE9 139 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 TMEM106AQ96A25 262 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 ZNF416Q9BWM5 594 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 ULBP2Q9BZM5 246 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 DEFB127Q9H1M4 99 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 ACKR4Q9NPB9 350 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 ZNF275Q9NSD4 429 aaPredicted RBP17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 RABL2AQ9UBK7 228 aaPredicted RBP17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 OR52A1Q9UKL2 312 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 CDV3Q9UKY7 258 aaKnown RBP17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 ING4Q9UNL4 249 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 RABL2BQ9UNT1 228 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 RCE1Q9Y256 329 aa17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 GUCA1AP43080 201 aaPredicted RBP17.88■□□□□ 0.45
RIPPLY3-201ENST00000329553 GSG1Q2KHT4 349 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms