RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 NKG7Q16617 165 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CNKSR3Q6P9H4 555 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 USP50Q70EL3 339 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TGIF2LXQ8IUE1 241 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CARFQ8N187 725 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 FAM24BQ8N5W8 94 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SIRT6Q8N6T7 355 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CLEC1AQ8NC01 280 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 GMLQ99445 158 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 LHX3Q9UBR4 397 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 PCDHGA9Q9Y5G4 932 aaKnown RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 A0A087WV62 115 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CCDC163A0A0D9SF12 145 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NHLRC3Q5JS37 347 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 RCBTB1Q8NDN9 531 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 GLIPR2Q9H4G4 154 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TRAPPC1Q9Y5R8 145 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 EP300Q09472 2414 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 A6NLC8 198 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TRAF3IP2O43734 574 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 MELKQ14680 651 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 C2orf76Q3KRA6 126 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 GATSQ8NAP1 163 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 OR5L1Q8NGL2 311 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 MSI2Q96DH6 328 aaKnown RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 OR8D2Q9GZM6 311 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF107Q9UII5 783 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 FLVCR1Q9Y5Y0 555 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 MYO9AB2RTY4 2548 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 C7orf66A4D0T2 115 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 IGHG1P01857 330 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 HLA-DQB1P01920 261 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NMBP08949 121 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 GNB3P16520 340 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NOVA1P51513 510 aaKnown RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SOX4Q06945 474 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 FAM27D1Q5T7N8 215 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NHLRC1Q6VVB1 395 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TMEM123Q8N131 208 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TMEM99Q8N816 258 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 FIBINQ8TAL6 211 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NUDT16L1Q9BRJ7 211 aaKnown RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NAA11Q9BSU3 229 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 GDF2Q9UK05 429 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SLC31A1O15431 190 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 RPL34P49207 117 aaKnown RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 HSF1Q00613 529 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF85Q03923 595 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 HYAL4Q2M3T9 481 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SLC36A2Q495M3 483 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF66Q6ZN08 573 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SLC16A14Q7RTX9 510 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 DTWD2Q8NBA8 298 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 RAB24Q969Q5 203 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 MS4A10Q96PG2 267 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ABHD1Q96SE0 405 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NMNAT3Q96T66 252 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 LNP1A1A4G5 178 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 H0Y8G0 127 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 USP2O75604 605 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CHRM2P08172 466 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NID1P14543 1247 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 GABRA1P14867 456 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 UBE2V2Q15819 145 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 COL5A1-AS1Q5SY13 56 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF787Q6DD87 383 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TCTN3Q6NUS6 607 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TMEM64Q6YI46 380 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 OR9A4Q8NGU2 314 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ARRDC2Q8TBH0 407 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CLDND1Q9NY35 253 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 YIPF1Q9Y548 306 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CXorf65A6NEN9 183 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ALOX5APP20292 161 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SDHBP21912 280 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 BMI1P35226 326 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ZP2Q05996 745 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CRMP1Q14194 572 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SLC10A1Q14973 349 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 NNATQ16517 81 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ALKAL1Q6UXT8 129 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SECTM1Q8WVN6 248 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CMBLQ96DG6 245 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 OR10C1Q96KK4 312 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 STACQ99469 402 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SLC35D1Q9NTN3 355 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SIRT5Q9NXA8 310 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 MTFP1Q9UDX5 166 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 ABHD16AO95870 558 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 MMP7P09237 267 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 HIST1H1CP16403 213 aaKnown RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CTSCP53634 463 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 FCRL6Q6DN72 434 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 DCXRQ7Z4W1 244 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 MFSD9Q8NBP5 474 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 SGCZQ96LD1 299 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 HINT3Q9NQE9 182 aaKnown RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 TINAGQ9UJW2 476 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 OR52A1Q9UKL2 312 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 CSNK1EP49674 416 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms