RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CPNE4Q96A23 557 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-201ENST00000317677 SPACA9Q96E40 222 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-201ENST00000317677 ALG8Q9BVK2 526 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 BEX1Q9HBH7 125 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 HRASLSQ9HDD0 168 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
CPNE1-201ENST00000317677 FLVCR2Q9UPI3 526 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 IGLV3-32A0A0A0MS00 114 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 A0A0D9SG52 128 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 COLCA2A8K830 154 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 EFNA2O43921 213 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 TXNDC12O95881 172 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 RAD52P43351 418 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 RIDAP52758 137 aaKnown RBP11.67□□□□□ -0.54
CPNE1-201ENST00000317677 DEFA6Q01524 100 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 FOXF1Q12946 379 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 PDZK1IP1Q13113 114 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 GGTLC2Q14390 218 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 TRAM1Q15629 374 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 MESTQ5EB52 335 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 LINC01590Q5TEZ4 76 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 KLBQ86Z14 1044 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 TEX19Q8NA77 164 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 OR10H4Q8NGA5 316 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 CT55Q8WUE5 264 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 SMPDL3BQ92485 455 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 FAM117AQ9C073 453 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 CCDC86Q9H6F5 360 aaKnown RBP11.67□□□□□ -0.54
CPNE1-201ENST00000317677 OPA3Q9H6K4 179 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 NKIRAS2Q9NYR9 191 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 KLRF1Q9NZS2 232 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 FOXJ2Q9P0K8 574 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 ABRACLQ9P1F3 81 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 GHRLQ9UBU3 117 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF629Q9UEG4 869 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-201ENST00000317677 ANKRD61A6NGH8 418 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 FTCDNL1E5RQL4 147 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 E9PI62 339 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 ETV2O00321 342 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-201ENST00000317677 DCTN6O00399 190 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 DVL2O14641 736 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 RNF13O43567 381 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 APEHP13798 732 aaKnown RBP11.66□□□□□ -0.54
CPNE1-201ENST00000317677 SDHAP31040 664 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 GDNFP39905 211 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 PMELP40967 661 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 FOLR3P41439 243 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 SUMO3P55854 103 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-201ENST00000317677 CXADRP78310 365 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 FOXK1P85037 733 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 PON3Q15166 354 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 LEG1Q6P5S2 330 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 RELL2Q8NC24 303 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-201ENST00000317677 POC1BQ8TC44 478 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 M1APQ8TC57 530 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 ST8SIA1Q92185 356 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 LIN37Q96GY3 246 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-201ENST00000317677 TSSK2Q96PF2 358 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 TAAR9Q96RI9 348 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 STRADBQ9C0K7 418 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 MFFQ9GZY8 342 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 OR10A4Q9H209 315 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 NOX3Q9HBY0 568 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF160Q9HCG1 818 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 VDAC3Q9Y277 283 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 PLEKHA6Q9Y2H5 1048 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 WIF1Q9Y5W5 379 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 CHCHD2Q9Y6H1 151 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-201ENST00000317677 CACNA1BQ00975 2339 aa11.66□□□□□ -0.54
CPNE1-201ENST00000317677 A0A1B0GVC2 190 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 DAPL1A0PJW8 107 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 A6NIN4 97 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 A8MVM7 634 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 H7C1C5 153 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 MAGEB4O15481 346 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-201ENST00000317677 AKR7A3O95154 331 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 RNF224P0DH78 156 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 ABOP16442 354 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 PYCR1P32322 319 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 DIO1P49895 249 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 LCN6P62502 163 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 Q0VFX4 171 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 INSL4Q14641 139 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 OLFML2AQ68BL7 652 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 C6orf15Q6UXA7 325 aaPredicted RBP11.65□□□□□ -0.54
CPNE1-201ENST00000317677 IL20RBQ6UXL0 311 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF561Q8N587 486 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 SLC25A36Q96CQ1 311 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 NTNG2Q96CW9 530 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 MFRPQ9BY79 579 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 TTTY10Q9BZA0 68 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF69Q9UC07 566 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 TCFL5Q9UL49 500 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 PADI1Q9ULC6 663 aa11.65□□□□□ -0.54
CPNE1-201ENST00000317677 C9orf170A2RU37 121 aa11.65□□□□□ -0.55
CPNE1-201ENST00000317677 FAM171A2A8MVW0 826 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms