RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 HAVCR1Q96D42 359 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 MAP6Q96JE9 813 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 RBM4Q9BWF3 364 aaKnown RBP13.82□□□□□ -0.2
LSM1-201ENST00000311351 CDADC1Q9BWV3 514 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 EGLN1Q9GZT9 426 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 ZDHHC8Q9ULC8 765 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 COMMD3-BMI1R4GMX3 469 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 B4DSR2 109 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 J3QW42 95 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 ACSM4P0C7M7 580 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 CLUP10909 449 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 HNF1AP20823 631 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 TUBG1P23258 451 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 KRTAP27-1Q3LI81 207 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 OR2T2Q6IF00 324 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 FBXW12Q6X9E4 464 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 SPATA24Q86W54 205 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 OR2Z1Q8NG97 314 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 OR2T4Q8NH00 348 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 PTP4A1Q93096 173 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 APOBEC3DQ96AK3 386 aaPredicted RBP13.81□□□□□ -0.2
LSM1-201ENST00000311351 COG8Q96MW5 612 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 DIRC2Q96SL1 478 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 FEVQ99581 238 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 ATF6BQ99941 703 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 ZNF665Q9H7R5 613 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 TUBG2Q9NRH3 451 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 WNK2Q9Y3S1 2297 aa13.81□□□□□ -0.2
LSM1-201ENST00000311351 F5H5K5 113 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 MSMBP08118 114 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 RAC2P15153 192 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 ZNF823P16415 610 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 SPI1P17947 270 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 ANOS1P23352 680 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 DVL1P1P54792 670 aaPredicted RBP13.8□□□□□ -0.2
LSM1-201ENST00000311351 COLCA1Q6ZS62 124 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 NAA40Q86UY6 237 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 GLCCI1Q86VQ1 547 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 HS3ST5Q8IZT8 346 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 BHLHE23Q8NDY6 225 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 OR10AD1Q8NGE0 317 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 ITLN1Q8WWA0 313 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 TIMD4Q96H15 378 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 NMNAT2Q9BZQ4 307 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 TMEFF2Q9UIK5 374 aaPredicted RBP13.8□□□□□ -0.2
LSM1-201ENST00000311351 KCNG2Q9UJ96 466 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 BAIAP2Q9UQB8 552 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 POMPQ9Y244 141 aa13.8□□□□□ -0.2
LSM1-201ENST00000311351 ARHGAP32A7KAX9 2087 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 ISPDA4D126 451 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 H3BN98 237 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 GNGT2O14610 69 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 DNAJC8O75937 253 aaPredicted RBP13.79□□□□□ -0.2
LSM1-201ENST00000311351 SPARCP09486 303 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 RASSF2P50749 326 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 SRSF2Q01130 221 aaKnown RBP13.79□□□□□ -0.2
LSM1-201ENST00000311351 GK3PQ14409 553 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 CD300LDQ6UXZ3 194 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 CXXC5Q7LFL8 322 aaKnown RBP13.79□□□□□ -0.2
LSM1-201ENST00000311351 ZNF511Q8NB15 262 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 OR5L1Q8NGL2 311 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 OR6K6Q8NGW6 343 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 RAB1CQ92928 201 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 TMEM186Q96B77 213 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 OR2V2Q96R30 315 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 HCAR1Q9BXC0 346 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 C1QTNF5Q9BXJ0 243 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 OCEL1Q9H607 264 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 MED20Q9H944 212 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 HIF1ANQ9NWT6 349 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 PDP1Q9P0J1 537 aaPredicted RBP13.79□□□□□ -0.2
LSM1-201ENST00000311351 STAB1Q9NY15 2570 aa13.79□□□□□ -0.2
LSM1-201ENST00000311351 TCRBV3S1A0A5B6 114 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 ARRDC5A6NEK1 342 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 RIIAD1A6NNX1 92 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 M0R135 149 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 PHF1O43189 567 aaPredicted RBP13.78□□□□□ -0.2
LSM1-201ENST00000311351 FKBP6O75344 327 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 DEAF1O75398 565 aaPredicted RBP13.78□□□□□ -0.2
LSM1-201ENST00000311351 E2F6O75461 281 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 ATP5HO75947 161 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 IFNGP01579 166 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 IGHV2-5P01817 119 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 LCATP04180 440 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 HOXB6P17509 224 aaKnown RBP13.78□□□□□ -0.2
LSM1-201ENST00000311351 TNFSF4P23510 183 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 SLC25A1P53007 311 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 CBX1P83916 185 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 ECH1Q13011 328 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 DCXRQ7Z4W1 244 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 OR51F2Q8NH61 342 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 ZNF799Q96GE5 643 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 GAL3ST1Q99999 423 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 CADM1Q9BY67 442 aaKnown RBP13.78□□□□□ -0.2
LSM1-201ENST00000311351 CMC2Q9NRP2 79 aa13.78□□□□□ -0.2
LSM1-201ENST00000311351 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
LSM1-201ENST00000311351 IGHV3-64DA0A0J9YX35 117 aa13.77□□□□□ -0.21
LSM1-201ENST00000311351 C5orf63A6NC05 138 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms