RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FAM198BQ6UWH4 519 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 FAM57BQ71RH2 274 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 BPIFB2Q8N4F0 458 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 OR10S1Q8NGN2 331 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 OR1J2Q8NGS2 313 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 SORCS2Q96PQ0 1159 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 POTEKPQ9BYX7 375 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 SELENOIQ9C0D9 397 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 HEXA-AS1Q9H8Q6 139 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF275Q9NSD4 429 aaPredicted RBP10.26□□□□□ -0.77
PTPN2-201ENST00000309660 PIPOXQ9P0Z9 390 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 IFNA7P01567 189 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 HCKP08631 526 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 GNB3P16520 340 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 PTGS2P35354 604 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 H2BFSP57053 126 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 TAS2R19P59542 299 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 OPCMLQ14982 345 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 PMS2CLQ68D20 193 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ANGPTL5Q86XS5 388 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 FAM109AQ8N4B1 249 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 NOXO1Q8NFA2 376 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 TMEM41AQ96HV5 264 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 UBQLN2Q9UHD9 624 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 CYB5R1Q9UHQ9 305 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 LHFPL6Q9Y693 200 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 TMEM82A0PJX8 343 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 FAM25EA8MYX2 175 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 AQP8O94778 261 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 MSX1P28360 303 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 DLX5P56178 289 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF121P58317 390 aaPredicted RBP10.26□□□□□ -0.77
PTPN2-201ENST00000309660 GABREP78334 506 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 THEM4Q5T1C6 240 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 SFRP5Q5T4F7 317 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF385CQ66K41 422 aaPredicted RBP10.26□□□□□ -0.77
PTPN2-201ENST00000309660 TMEM81Q6P7N7 255 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 TRAPPC6BQ86SZ2 158 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ELMOD2Q8IZ81 293 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 GPX8Q8TED1 209 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 SFXN2Q96NB2 322 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ARL6Q9H0F7 186 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 BANF2Q9H503 90 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 GPR84Q9NQS5 396 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 FAM206AQ9NX38 181 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 PTTG3PQ9NZH4 202 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 PILRBQ9UKJ0 227 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 EML6Q6ZMW3 1958 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 C9J4A7 227 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 MPIG6BO95866 241 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 CCL3P10147 92 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 NAGAP17050 411 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 IGFBP3P17936 291 aaPredicted RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 CXCL2P19875 107 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 RAB3AP20336 220 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 ANOS1P23352 680 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 MMP16P51512 607 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 SCAND1P57086 179 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 CXADRP78310 365 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 CSRP2Q16527 193 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 TRIM61Q5EBN2 209 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 FAM166AQ6J272 317 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 OR2AK2Q8NG84 335 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 OR1M1Q8NGA1 313 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 OR5D14Q8NGL3 314 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 RBM24Q9BX46 236 aaKnown RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF160Q9HCG1 818 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 EMC3Q9P0I2 261 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 COLQQ9Y215 455 aaPredicted RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 CCSO14618 274 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 TRAF3IP2O43734 574 aaPredicted RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 SRSF10O75494 262 aaKnown RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 NFYAP23511 347 aaPredicted RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF93P35789 620 aaPredicted RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 RAP2BP61225 183 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 RPS18P62269 152 aaKnown RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 SORDQ00796 357 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 ATXN7L3Q14CW9 347 aaPredicted RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 ALKAL2Q6UX46 152 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 FJX1Q86VR8 437 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 CASTOR1Q8WTX7 329 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 UCN2Q96RP3 112 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 ELL3Q9HB65 397 aaPredicted RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 IFT46Q9NQC8 304 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 KLK13Q9UKR3 277 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 SLC5A6Q9Y289 635 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 NOP16Q9Y3C1 178 aaKnown RBP10.25□□□□□ -0.77
PTPN2-201ENST00000309660 MAB21L2Q9Y586 359 aa10.25□□□□□ -0.77
PTPN2-201ENST00000309660 LEUTXA8MZ59 168 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF878C9JN71 531 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 F5H5P2 479 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 GIPP09681 153 aaPredicted RBP10.24□□□□□ -0.77
PTPN2-201ENST00000309660 PGA4P0DJD7 388 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 PGA3P0DJD8 388 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 VAMP1P23763 118 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 PRSS12P56730 875 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 RNASE10Q5GAN6 216 aaKnown RBP10.24□□□□□ -0.77
PTPN2-201ENST00000309660 NAA40Q86UY6 237 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 AGBL5Q8NDL9 886 aa10.24□□□□□ -0.77
PTPN2-201ENST00000309660 CYYR1Q96J86 154 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms