RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 SMN1Q16637 294 aaKnown RBP19.22■□□□□ 0.67
HOXD4-201ENST00000306324 KCTD18Q6PI47 426 aaPredicted RBP19.22■□□□□ 0.67
HOXD4-201ENST00000306324 LRRN1Q6UXK5 716 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 KRT77Q7Z794 578 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 CDH24Q86UP0 819 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 NAA40Q86UY6 237 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 RFLNBQ8N5W9 214 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 OR10H4Q8NGA5 316 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 MNTQ99583 582 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 HSPE1-MOB4S4R3N1 261 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 USF3Q68DE3 2245 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 CSMD1Q96PZ7 3565 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 ZNF670-ZNF695F2Z2N8 137 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 PSMD9O00233 223 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 OPRL1P41146 370 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 MSMPQ1L6U9 139 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 USP51Q70EK9 711 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 RHOUQ7L0Q8 258 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 ZNF283Q8N7M2 679 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 SLC25A40Q8TBP6 338 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 IPCEF1Q8WWN9 437 aaPredicted RBP19.22■□□□□ 0.67
HOXD4-201ENST00000306324 OR2J1Q9GZK6 312 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 PLK3Q9H4B4 646 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 CBLN4Q9NTU7 201 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 DUSP13Q9UII6 198 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 ARID1AO14497 2285 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 PHYHO14832 338 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 ATE1O95260 518 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 LCATP04180 440 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 OR2T7P0C7T2 308 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 CD53P19397 219 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 DNASE1P24855 282 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 OTX1P32242 354 aaPredicted RBP19.21■□□□□ 0.67
HOXD4-201ENST00000306324 HSPA13P48723 471 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 DTX2Q86UW9 622 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 OR2T27Q8NH04 317 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 ASB17Q8WXJ9 295 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 MRPL24Q96A35 216 aaKnown RBP19.21■□□□□ 0.67
HOXD4-201ENST00000306324 APOBEC3DQ96AK3 386 aaPredicted RBP19.21■□□□□ 0.67
HOXD4-201ENST00000306324 SYT3Q9BQG1 590 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 TRAF4Q9BUZ4 470 aaPredicted RBP19.21■□□□□ 0.67
HOXD4-201ENST00000306324 MROQ9BYG7 248 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 MRPL37Q9BZE1 423 aaKnown RBP19.21■□□□□ 0.67
HOXD4-201ENST00000306324 SLCO1C1Q9NYB5 712 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 IKZF2Q9UKS7 526 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 STARD10Q9Y365 291 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 RPL36Q9Y3U8 105 aaKnown RBP19.21■□□□□ 0.67
HOXD4-201ENST00000306324 N6AMT1Q9Y5N5 214 aa19.21■□□□□ 0.67
HOXD4-201ENST00000306324 CYSRT1A8MQ03 144 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 CD8AP01732 235 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 SLC2A1P11166 492 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 CX3CR1P49238 355 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF718Q3SXZ3 478 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF322Q6U7Q0 402 aaPredicted RBP19.2■□□□□ 0.66
HOXD4-201ENST00000306324 DRAM2Q6UX65 266 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 THAP5Q7Z6K1 395 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 LRP11Q86VZ4 500 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 C1orf174Q8IYL3 243 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 SYNPRQ8TBG9 265 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 PIGTQ969N2 578 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 LGALS12Q96DT0 336 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 C1QTNF5Q9BXJ0 243 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 POFUT1Q9H488 388 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 LRP12Q9Y561 859 aa19.2■□□□□ 0.66
HOXD4-201ENST00000306324 A0A1W2PQL4 384 aaPredicted RBP19.19■□□□□ 0.66
HOXD4-201ENST00000306324 PRR32B1ATL7 298 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 B9A039 149 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 GCH1P30793 250 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 CDK5R2Q13319 367 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 SSX6Q7RTT6 188 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 OR5L1Q8NGL2 311 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 MARS2Q96GW9 593 aaKnown RBP19.19■□□□□ 0.66
HOXD4-201ENST00000306324 COG8Q96MW5 612 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 OR8B4Q96RC9 309 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 DOK1Q99704 481 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 BRD7Q9NPI1 651 aa19.19■□□□□ 0.66
HOXD4-201ENST00000306324 J3QW42 95 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 MAGEB4O15481 346 aaPredicted RBP19.18■□□□□ 0.66
HOXD4-201ENST00000306324 CLPTM1O96005 669 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 APOC1P02654 83 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 ANXA2P07355 339 aaKnown RBP19.18■□□□□ 0.66
HOXD4-201ENST00000306324 KLF3P57682 345 aaPredicted RBP19.18■□□□□ 0.66
HOXD4-201ENST00000306324 SELENOVP59797 346 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 SNRPD2P62316 118 aaKnown RBP19.18■□□□□ 0.66
HOXD4-201ENST00000306324 EFNB3Q15768 340 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 SNCBQ16143 134 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 MST1LQ2TV78 715 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 COLCA1Q6ZS62 124 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF679Q8IYX0 411 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 KLF14Q8TD94 323 aaPredicted RBP19.18■□□□□ 0.66
HOXD4-201ENST00000306324 CXorf56Q9H5V9 222 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 PTTG3PQ9NZH4 202 aa19.18■□□□□ 0.66
HOXD4-201ENST00000306324 EXOGQ9Y2C4 368 aaKnown RBP19.18■□□□□ 0.66
HOXD4-201ENST00000306324 A0A1W2PPW3 197 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 BMP4P12644 408 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF250P15622 560 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 CDKN1AP38936 164 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 MPV17P39210 176 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 ACTC1P68032 377 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 ACTA1P68133 377 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms