RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 EIF4EP06730 217 aaKnown RBP14.43□□□□□ -0.1
USP42-201ENST00000306177 NFYBP25208 207 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 C2orf76Q3KRA6 126 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 C12orf73Q69YU5 71 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 RBMXL3Q8N7X1 1067 aaKnown RBP14.43□□□□□ -0.1
USP42-201ENST00000306177 REEP6Q96HR9 211 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 PLA2G12AQ9BZM1 189 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 SLCO1C1Q9NYB5 712 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 BOLA1Q9Y3E2 137 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 PUS1Q9Y606 427 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP42-201ENST00000306177 ARPC4-TTLL3A0A0A6YYG9 625 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 IGHV3-15A0A0B4J1V0 119 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 DHHO43323 396 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 FOLR1P15328 257 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 DRD3P35462 400 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 TMUB2Q71RG4 321 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 LINC01555Q8NAE3 123 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 OR2G2Q8NGZ5 317 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 PCNPQ8WW12 178 aaKnown RBP14.43□□□□□ -0.1
USP42-201ENST00000306177 C1QTNF6Q9BXI9 259 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 AGAP14A8MT82 685 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 SLC35G3Q8N808 338 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 ZNF2Q9BSG1 426 aaPredicted RBP14.43□□□□□ -0.1
USP42-201ENST00000306177 EDEM2Q9BV94 578 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 GDF2Q9UK05 429 aaPredicted RBP14.43□□□□□ -0.1
USP42-201ENST00000306177 A0A096LPE4 126 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 A0A1W2PPZ6 126 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 CCSO14618 274 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 LALBAP00709 142 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 C1QBP02746 253 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 RPA2P15927 270 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 RHOUQ7L0Q8 258 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 SLC30A7Q8NEW0 376 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 RHNO1Q9BSD3 238 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 A0A0B4J2E0 115 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 A0A1B0GX12 115 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 ANKRD34BA5PLL1 514 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 TMEM127O75204 238 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 CD1EP15812 388 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 ZNF573Q86YE8 665 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 MSRB3Q8IXL7 192 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 IL20Q9NYY1 176 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 TMEFF2Q9UIK5 374 aaPredicted RBP14.42□□□□□ -0.1
USP42-201ENST00000306177 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 RPS10-NUDT3A0A1W2PQS6 291 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 ZNF705FA8MVS1 300 aaPredicted RBP14.42□□□□□ -0.1
USP42-201ENST00000306177 ZNF705DP0CH99 300 aaPredicted RBP14.42□□□□□ -0.1
USP42-201ENST00000306177 ZNF705BP0CI00 300 aaPredicted RBP14.42□□□□□ -0.1
USP42-201ENST00000306177 COL9A1P20849 921 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 RPS10P46783 165 aaKnown RBP14.42□□□□□ -0.1
USP42-201ENST00000306177 DSCR4P56555 118 aaPredicted RBP14.42□□□□□ -0.1
USP42-201ENST00000306177 BTN1A1Q13410 526 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 SCCPDHQ8NBX0 429 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 CPEB3Q8NE35 698 aaKnown RBP14.42□□□□□ -0.1
USP42-201ENST00000306177 OR51H1Q8NH63 302 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 SCARB1Q8WTV0 552 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 DDOQ99489 341 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 WNT16Q9UBV4 365 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 HSBP1L1C9JCN9 74 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 SH2D1BO14796 132 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 ST8SIA3O43173 380 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 CTSVO60911 334 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 FOXB2Q5VYV0 432 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 SPACA5Q96QH8 159 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 TAAR9Q96RI9 348 aa14.42□□□□□ -0.1
USP42-201ENST00000306177 DUSP1P28562 367 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 TMEM92Q6UXU6 159 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 ZNF808Q8N4W9 903 aaPredicted RBP14.41□□□□□ -0.1
USP42-201ENST00000306177 OR2V1Q8NHB1 315 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 GPBAR1Q8TDU6 330 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 ING1Q9UK53 422 aaPredicted RBP14.41□□□□□ -0.1
USP42-201ENST00000306177 HRO43593 1189 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 NXPH3O95157 252 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 KIR2DL3P43628 341 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 LGALS4P56470 323 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 PCBP4P57723 403 aaKnown RBP14.41□□□□□ -0.1
USP42-201ENST00000306177 TMPRSS11FQ6ZWK6 438 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 CFHR5Q9BXR6 569 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 GPATCH2Q9NW75 528 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 POLR2AP24928 1970 aaKnown RBP14.41□□□□□ -0.1
USP42-201ENST00000306177 NKX2-1P43699 371 aaPredicted RBP14.41□□□□□ -0.1
USP42-201ENST00000306177 DUSP2Q05923 314 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 ELFN2Q5R3F8 820 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 ZNF547Q8IVP9 402 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 NOXO1Q8NFA2 376 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 TRAV1-2A0A0B4J238 106 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 NDUFB7P17568 137 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 SOHLH1Q5JUK2 328 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 H2BFWTQ7Z2G1 175 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 CATSPERDQ86XM0 798 aa14.41□□□□□ -0.1
USP42-201ENST00000306177 CCDC187A0A096LP49 1063 aa14.4□□□□□ -0.1
USP42-201ENST00000306177 ABCD3P28288 659 aa14.4□□□□□ -0.1
USP42-201ENST00000306177 KTI12Q96EK9 354 aaPredicted RBP14.4□□□□□ -0.1
USP42-201ENST00000306177 UFSP2Q9NUQ7 469 aa14.4□□□□□ -0.1
USP42-201ENST00000306177 ANKRD31Q8N7Z5 1873 aa14.4□□□□□ -0.1
USP42-201ENST00000306177 OR8U8P0C7N1 319 aa14.4□□□□□ -0.1
USP42-201ENST00000306177 TBPP20226 339 aa14.4□□□□□ -0.1
USP42-201ENST00000306177 TRA2AQ13595 282 aaKnown RBP eCLIP14.4□□□□□ -0.1
USP42-201ENST00000306177 HIST2H3PS2Q5TEC6 136 aa14.4□□□□□ -0.1
USP42-201ENST00000306177 LSRQ86X29 649 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms