RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PLA2G3Q9NZ20 509 aa5.78□□□□□ -1.48
USP47-201ENST00000305481 PAIP2BQ9ULR5 123 aaKnown RBP5.78□□□□□ -1.48
USP47-201ENST00000305481 POLR1DQ9Y2S0 133 aa5.78□□□□□ -1.48
USP47-201ENST00000305481 RTTNQ86VV8 2226 aa5.78□□□□□ -1.48
USP47-201ENST00000305481 LOC100289279A0A1B0GTE1 492 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 TMEM272A0A1B0GTI8 110 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 DCDC2BA2VCK2 349 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 INMT-MINDY4F8WBC2 141 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 STMND1H3BQB6 276 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 XRCC3O43542 346 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 DNPH1O43598 174 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 SULT1B1O43704 296 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 CXCL13O43927 109 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 GMDSO60547 372 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 GLSO94925 669 aaPredicted RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 KDM4BO94953 1096 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 TRAPPC2P0DI81 140 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 TRAPPC2BP0DI82 140 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ZNF121P58317 390 aaPredicted RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 LSM6P62312 80 aaKnown RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 TGIF1Q15583 401 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ATP1A1-AS1Q5TC04 95 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 KLHL24Q6TFL4 600 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ZNF813Q6ZN06 617 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 UTS2BQ765I0 119 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 NAA40Q86UY6 237 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 DTX1Q86Y01 620 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 C20orf196Q8IYI0 205 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 OR2M7Q8NG81 312 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 OR8B12Q8NGG6 310 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 OR10D3Q8NH80 312 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 OR51E1Q8TCB6 317 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 SFXN2Q96NB2 322 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 SF3B5Q9BWJ5 86 aaKnown RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 BEX2Q9BXY8 128 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 CKLFQ9UBR5 152 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 FLVCR1Q9Y5Y0 555 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 SPENQ96T58 3664 aaKnown RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 LOC390937A0A1W2PQ73 354 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 LDLRAD4O15165 306 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 DHHO43323 396 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 TCRBP04435 133 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 GSTT2P0CG29 244 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 GSTT2BP0CG30 244 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ARSBP15848 533 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 MSR1P21757 451 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ITGA3P26006 1051 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 HTR2CP28335 458 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 HIST1H3AP68431 136 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 SNTB2Q13425 540 aaKnown RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 DYRK1AQ13627 763 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 CSRP2Q16527 193 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 HIST2H3PS2Q5TEC6 136 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ABHD17BQ5VST6 288 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ZNF529Q6P280 563 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 LINC00696Q6ZRV3 163 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 HIST2H3AQ71DI3 136 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 RNF144BQ7Z419 303 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 SULF2Q8IWU5 870 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 FCAMRQ8WWV6 532 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 FYTTD1Q96QD9 318 aaKnown RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 NELFAQ9H3P2 528 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 RANGRFQ9HD47 186 aaPredicted RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 NUDT15Q9NV35 164 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ZNF221Q9UK13 617 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 RCE1Q9Y256 329 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 TRAV6A0A075B6T7 132 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 GGT3PA6NGU5 568 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 SYT7O43581 403 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 KRT33AO76009 404 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 HSD11B1P28845 292 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 BTG1P62324 171 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 OR1C1Q15619 314 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 C1orf100Q5SVJ3 147 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 LRRC18Q8N456 261 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 DEFB124Q8NES8 71 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 OR4D6Q8NGJ1 314 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 OR2V1Q8NHB1 315 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 LILRB1Q8NHL6 650 aaPredicted RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 FBXO17Q96EF6 278 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ZNF845Q96IR2 970 aaPredicted RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 DMRTB1Q96MA1 342 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 FAM173AQ9BQD7 235 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 RBM24Q9BX46 236 aaKnown RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 CACNG6Q9BXT2 260 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ZNF703Q9H7S9 590 aaPredicted RBP5.77□□□□□ -1.49
USP47-201ENST00000305481 HRASLSQ9HDD0 168 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 ZNF292O60281 2723 aa5.77□□□□□ -1.49
USP47-201ENST00000305481 A0A0A6YYJ9 748 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 SPAARA0A1B0GVQ0 90 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ANKRD20A5PA0PJZ0 165 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 OR5H15A6NDH6 313 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 POU3F2P20265 443 aaPredicted RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 CTSSP25774 331 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 CX3CR1P49238 355 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 GALK2Q01415 458 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 AIMP2Q13155 320 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 GLT8D1Q68CQ7 371 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ABLIM2Q6H8Q1 611 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 PLXDC2Q6UX71 529 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms