RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ZNF35P13682 527 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 PTAFRP25105 342 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 WNT5AP41221 380 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 CX3CR1P49238 355 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 DOC2BQ14184 412 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 LIPNQ5VXI9 398 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 FAM220AQ7Z4H9 259 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 SYS1Q8N2H4 156 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 SPRYD4Q8WW59 207 aaPredicted RBP23.48■■□□□ 1.35
HDAC3-201ENST00000305264 DOK1Q99704 481 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF696Q9H7X3 374 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 GRIP1Q9Y3R0 1128 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 TMEM129A0AVI4 362 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 MYL12BO14950 172 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 RPP14O95059 124 aaKnown RBP23.47■■□□□ 1.35
HDAC3-201ENST00000305264 SLC2A1P11166 492 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 MAP2K4P45985 399 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 SLC6A9P48067 706 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 NCMAPQ5T1S8 102 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF283Q8N7M2 679 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 MRPL48Q96GC5 212 aaKnown RBP23.47■■□□□ 1.35
HDAC3-201ENST00000305264 ERGIC3Q9Y282 383 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 ABCD4O14678 606 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 TPTEP56180 551 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 PSMA6P60900 246 aaKnown RBP23.47■■□□□ 1.35
HDAC3-201ENST00000305264 BEX5Q5H9J7 111 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF101Q8IZC7 436 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 NANOGP1Q8N7R0 232 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF485Q8NCK3 441 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 OR1J2Q8NGS2 313 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 OR52N1Q8NH53 320 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 RNF166Q96A37 237 aaPredicted RBP23.47■■□□□ 1.35
HDAC3-201ENST00000305264 PELI1Q96FA3 418 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 SPOCK3Q9BQ16 436 aa23.47■■□□□ 1.35
HDAC3-201ENST00000305264 ESRP2Q9H6T0 727 aaKnown RBP23.47■■□□□ 1.35
HDAC3-201ENST00000305264 HRNRQ86YZ3 2850 aaPredicted RBP23.46■■□□□ 1.35
HDAC3-201ENST00000305264 ATP6V1G2-DDX39BF2Z307 99 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 CRYAAP02489 173 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 PSMB10P40306 273 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 MFGE8Q08431 387 aaPredicted RBP23.46■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF773Q6PK81 442 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 TMPRSS11AQ6ZMR5 421 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 PIAS4Q8N2W9 510 aaPredicted RBP23.46■■□□□ 1.35
HDAC3-201ENST00000305264 OR51B6Q9H340 312 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 NIPAL2Q9H841 368 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 BRD7Q9NPI1 651 aa23.46■■□□□ 1.35
HDAC3-201ENST00000305264 SRSF10O75494 262 aaKnown RBP23.45■■□□□ 1.35
HDAC3-201ENST00000305264 PNPP00491 289 aa23.45■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF121P58317 390 aaPredicted RBP23.45■■□□□ 1.35
HDAC3-201ENST00000305264 KCTD20Q7Z5Y7 419 aa23.45■■□□□ 1.35
HDAC3-201ENST00000305264 IL17RDQ8NFM7 739 aa23.45■■□□□ 1.35
HDAC3-201ENST00000305264 GATAD2BQ8WXI9 593 aa23.45■■□□□ 1.35
HDAC3-201ENST00000305264 PSMG3-AS1Q96PY0 264 aa23.45■■□□□ 1.35
HDAC3-201ENST00000305264 HS3ST6Q96QI5 342 aa23.45■■□□□ 1.35
HDAC3-201ENST00000305264 MND1Q9BWT6 205 aa23.45■■□□□ 1.35
HDAC3-201ENST00000305264 ABCA4P78363 2273 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 PLCE1Q9P212 2302 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 DCHS2Q6V1P9 2916 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 MT-ND5P03915 603 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 LOXP28300 417 aaPredicted RBP23.45■■□□□ 1.34
HDAC3-201ENST00000305264 DRAM2Q6UX65 266 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 SPARTQ8N0X7 666 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 RORBQ92753 470 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 PIK3IP1Q96FE7 263 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 C4orf45Q96LM5 186 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 MYCBPQ99417 103 aaPredicted RBP23.45■■□□□ 1.34
HDAC3-201ENST00000305264 FAM206AQ9NX38 181 aa23.45■■□□□ 1.34
HDAC3-201ENST00000305264 LSM2Q9Y333 95 aaKnown RBP23.45■■□□□ 1.34
HDAC3-201ENST00000305264 C5orf63A6NC05 138 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 E9PI62 339 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 MRPS14O60783 128 aaKnown RBP23.44■■□□□ 1.34
HDAC3-201ENST00000305264 DCTDP32321 178 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 ADAM5Q6NVV9 412 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 RFPL4BQ6ZWI9 263 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 PRSS45Q7RTY3 260 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 OR5M11Q96RB7 305 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 DCLRE1CQ96SD1 692 aaKnown RBP23.44■■□□□ 1.34
HDAC3-201ENST00000305264 KCNS3Q9BQ31 491 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 N6AMT1Q9Y5N5 214 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 R4GMQ9 66 aa23.44■■□□□ 1.34
HDAC3-201ENST00000305264 TMEM269A0A1B0GVZ9 245 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 LALBAP00709 142 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 NGFP01138 241 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 ANXA2P07355 339 aaKnown RBP23.43■■□□□ 1.34
HDAC3-201ENST00000305264 TACSTD2P09758 323 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 FAM157BP0CG42 384 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 WNT4P56705 351 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 TBCEQ15813 527 aaPredicted RBP23.43■■□□□ 1.34
HDAC3-201ENST00000305264 ZNF829Q3KNS6 432 aaPredicted RBP23.43■■□□□ 1.34
HDAC3-201ENST00000305264 SP5Q6BEB4 398 aaPredicted RBP23.43■■□□□ 1.34
HDAC3-201ENST00000305264 XAF1Q6GPH4 301 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 KLBQ86Z14 1044 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 SNX5Q9Y5X3 404 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 ROS1P08922 2347 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 EMX1Q04741 257 aaPredicted RBP23.43■■□□□ 1.34
HDAC3-201ENST00000305264 SNAI3Q3KNW1 292 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 TSPAN14Q8NG11 270 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 RADILQ96JH8 1075 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 C1QTNF5Q9BXJ0 243 aa23.43■■□□□ 1.34
HDAC3-201ENST00000305264 ICMTO60725 284 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms