RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 C22orf42Q6IC83 251 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF544Q6NX49 715 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 CCDC36Q8IYA8 594 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 CPEB3Q8NE35 698 aaKnown RBP21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 NDNFQ8TB73 568 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 SLC17A5Q9NRA2 495 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 ATPIF1Q9UII2 106 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 MEMO1Q9Y316 297 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 MSTNO14793 375 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 UBL3O95164 117 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 SERPINA3P01011 423 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 RAB1AP62820 205 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 GALK2Q01415 458 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 TMEM211Q6ICI0 200 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 NCCRP1Q6ZVX7 275 aaPredicted RBP21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 ELMOD2Q8IZ81 293 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 RDH10Q8IZV5 341 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 SLC7A6Q92536 515 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF75AQ96N20 296 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 PIGMQ9H3S5 423 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 RNF121Q9H920 327 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 NUFIP1Q9UHK0 495 aaKnown RBP21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 ACOD1A6NK06 481 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 A8MXE2 369 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 RAD51DO75771 328 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 ISG15P05161 165 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 DBHP09172 617 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 CX3CR1P49238 355 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF121P58317 390 aaPredicted RBP21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 SFRP5Q5T4F7 317 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 NAA40Q86UY6 237 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 CXorf67Q86X51 503 aaPredicted RBP21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF676Q8N7Q3 588 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 PBOV1Q9GZY1 135 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 COMMD4Q9H0A8 199 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 PPIL3Q9H2H8 161 aaKnown RBP21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 GALNT8Q9NY28 637 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 GSTK1Q9Y2Q3 226 aa21.47■■□□□ 1.03
GTF2A1-201ENST00000298173 COL6A6A6NMZ7 2263 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 TRGV8A0A0C4DH27 118 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 TRBV5-5A0A0J9YX44 114 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 CIB4A0PJX0 185 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 F5H5K5 113 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 TTRP02766 147 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 COX5BP10606 129 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 CASP6P55212 293 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF283Q8N7M2 679 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 SPTSSAQ969W0 71 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 DCSTAMPQ9H295 470 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 MOB1AQ9H8S9 216 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF319Q9P2F9 582 aa21.46■■□□□ 1.03
GTF2A1-201ENST00000298173 ARPC4-TTLL3A0A0A6YYG9 625 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 M0R135 149 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 ATXN7O15265 892 aaPredicted RBP21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 GATBO75879 557 aaKnown RBP21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 APOC1P02654 83 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 CD79AP11912 226 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 ZNF182P17025 639 aaPredicted RBP21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 ANOS1P23352 680 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 TUBA1BP68363 451 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 TSC22D1Q15714 1073 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 ZMAT1Q5H9K5 638 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 TMEM53Q6P2H8 277 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 USP43Q70EL4 1123 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 TUBA1AQ71U36 451 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 CEACAM19Q7Z692 300 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 LIX1LQ8IVB5 337 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 DYNC2LI1Q8TCX1 351 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 NANOS1Q8WY41 292 aaKnown RBP21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 ZNF799Q96GE5 643 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 KCTD7Q96MP8 289 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 BRD7Q9NPI1 651 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 JKAMPQ9P055 326 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 GTF2A1LQ9UNN4 478 aa21.45■■□□□ 1.02
GTF2A1-201ENST00000298173 BMP5P22003 454 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 HTR5AP47898 357 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 GSG1Q2KHT4 349 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 ODF4Q2M2E3 257 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 BCL2L15Q5TBC7 163 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 MYO7BQ6PIF6 2116 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 ZNF704Q6ZNC4 412 aaPredicted RBP21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 ZNF584Q8IVC4 421 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 WDR31Q8NA23 367 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 OR10AC1Q8NH08 325 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 PHYHIPQ92561 330 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 RND1Q92730 232 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 PTTG2Q9NZH5 202 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 OSGIN2Q9Y236 505 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 ACSM4P0C7M7 580 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 SLC2A1P11166 492 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 HGFACQ04756 655 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 DRAM2Q6UX65 266 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 MRGPRGQ86SM5 289 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 C17orf78Q8N4C9 275 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 KBTBD8Q8NFY9 601 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 OR14A2Q96R54 314 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 DCUN1D5Q9BTE7 237 aa21.44■■□□□ 1.02
GTF2A1-201ENST00000298173 PCNX1Q96RV3 2341 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 LOC100509620A0A075B734 347 aa21.43■■□□□ 1.02
GTF2A1-201ENST00000298173 ZNF879B4DU55 563 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms