RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TAS2R4Q9NYW5 299 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 FLVCR1Q9Y5Y0 555 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 KLRC4-KLRK1H3BQV0 150 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 P2RY10O00398 339 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 EFSO43281 561 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 TRAPPC2P0DI81 140 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 TRAPPC2BP0DI82 140 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 CALCBP10092 127 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 MMP15P51511 669 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 CLDN18P56856 261 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 PMP22Q01453 160 aa18.85■□□□□ 0.61
SOX17-201ENST00000297316 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.85■□□□□ 0.61
SOX17-201ENST00000297316 FREM1Q5H8C1 2179 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 FAM240BA0A1B0GVZ2 78 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 DNPH1O43598 174 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 TLX3O43711 291 aaPredicted RBP18.84■□□□□ 0.61
SOX17-201ENST00000297316 BTCP35070 178 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 TMEM54Q969K7 222 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 DEFB127Q9H1M4 99 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 ASH2LQ9UBL3 628 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 NUFIP1Q9UHK0 495 aaKnown RBP18.84■□□□□ 0.61
SOX17-201ENST00000297316 POLR1DQ9Y2S0 133 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 ITGA5P08648 1049 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 PTHLHP12272 177 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 KRT74Q7RTS7 529 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 ZFP62Q8NB50 900 aaPredicted RBP18.84■□□□□ 0.61
SOX17-201ENST00000297316 PLPP7Q8NBV4 271 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 OR51A2Q8NGJ7 313 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 SLC7A6Q92536 515 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 ABCG5Q9H222 651 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 KLK13Q9UKR3 277 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 CDV3Q9UKY7 258 aaKnown RBP18.84■□□□□ 0.61
SOX17-201ENST00000297316 FOXJ3Q9UPW0 622 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 BOLA1Q9Y3E2 137 aa18.84■□□□□ 0.61
SOX17-201ENST00000297316 RER1O15258 196 aa18.83■□□□□ 0.61
SOX17-201ENST00000297316 TNFSF10P50591 281 aa18.83■□□□□ 0.61
SOX17-201ENST00000297316 MMP16P51512 607 aa18.83■□□□□ 0.61
SOX17-201ENST00000297316 PLET1Q6UQ28 207 aa18.83■□□□□ 0.61
SOX17-201ENST00000297316 SCMH1Q96GD3 660 aa18.83■□□□□ 0.61
SOX17-201ENST00000297316 RANGRFQ9HD47 186 aaPredicted RBP18.83■□□□□ 0.61
SOX17-201ENST00000297316 STEAP1Q9UHE8 339 aa18.83■□□□□ 0.61
SOX17-201ENST00000297316 FOXD3Q9UJU5 478 aaPredicted RBP18.83■□□□□ 0.61
SOX17-201ENST00000297316 HHLA2Q9UM44 414 aa18.83■□□□□ 0.61
SOX17-201ENST00000297316 TTRP02766 147 aa18.83■□□□□ 0.6
SOX17-201ENST00000297316 ISG15P05161 165 aa18.83■□□□□ 0.6
SOX17-201ENST00000297316 IGFBP3P17936 291 aaPredicted RBP18.83■□□□□ 0.6
SOX17-201ENST00000297316 CDK10Q15131 360 aa18.83■□□□□ 0.6
SOX17-201ENST00000297316 SGCAQ16586 387 aa18.83■□□□□ 0.6
SOX17-201ENST00000297316 BCL2L15Q5TBC7 163 aa18.83■□□□□ 0.6
SOX17-201ENST00000297316 ABLIM2Q6H8Q1 611 aa18.83■□□□□ 0.6
SOX17-201ENST00000297316 ASCC1Q8N9N2 400 aaKnown RBP18.83■□□□□ 0.6
SOX17-201ENST00000297316 OR13C3Q8NGS6 347 aa18.83■□□□□ 0.6
SOX17-201ENST00000297316 FYTTD1Q96QD9 318 aaKnown RBP18.83■□□□□ 0.6
SOX17-201ENST00000297316 SF3B5Q9BWJ5 86 aaKnown RBP18.83■□□□□ 0.6
SOX17-201ENST00000297316 PNRC2Q9NPJ4 139 aaKnown RBP18.83■□□□□ 0.6
SOX17-201ENST00000297316 ACSM4P0C7M7 580 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 ACHEP22303 614 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 PTH2RP49190 550 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 EFNB2P52799 333 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 PITPNAQ00169 270 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 LINGO2Q7L985 606 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 BIVMQ86UB2 503 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 OR51D1Q8NGF3 324 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 LILRB4Q8NHJ6 448 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 RBM24Q9BX46 236 aaKnown RBP18.82■□□□□ 0.6
SOX17-201ENST00000297316 CACNG2Q9Y698 323 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 CDK2P24941 298 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 NHLH1Q02575 133 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 KCNMB1Q16558 191 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 SIAH3Q8IW03 269 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 UBASH3BQ8TF42 649 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 HAVCR1Q96D42 359 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 SLX1AQ9BQ83 275 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 BEX2Q9BXY8 128 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 PBOV1Q9GZY1 135 aa18.82■□□□□ 0.6
SOX17-201ENST00000297316 DMXL2Q8TDJ6 3036 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 TMEM127O75204 238 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 ZNF708P17019 499 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 SLC6A1P30531 599 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 BAIAP2L2Q6UXY1 529 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 OR2AJ1Q8NGZ0 328 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 SMIM4Q8WVI0 70 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 THRSPQ92748 146 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 CPNE4Q96A23 557 aaPredicted RBP18.81■□□□□ 0.6
SOX17-201ENST00000297316 ZNF416Q9BWM5 594 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 PLSCR3Q9NRY6 295 aa18.81■□□□□ 0.6
SOX17-201ENST00000297316 PAQR5Q9NXK6 330 aaPredicted RBP18.81■□□□□ 0.6
SOX17-201ENST00000297316 CTDSPLO15194 276 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 GSTZ1O43708 216 aaPredicted RBP18.8■□□□□ 0.6
SOX17-201ENST00000297316 SLC2A1P11166 492 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 SDHBP21912 280 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 PRKXP51817 358 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 ART1P52961 327 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 HYAL4Q2M3T9 481 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 PLA1AQ53H76 456 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 ZNF704Q6ZNC4 412 aaPredicted RBP18.8■□□□□ 0.6
SOX17-201ENST00000297316 C20orf196Q8IYI0 205 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 LRRC18Q8N456 261 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 RNF170Q96K19 258 aa18.8■□□□□ 0.6
SOX17-201ENST00000297316 TMEM246Q9BRR3 403 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms