RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 STEAP1Q9UHE8 339 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 TVP23AA6NH52 213 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 KHDRBS3O75525 346 aaKnown RBP14.92□□□□□ -0.02
CPSF4-201ENST00000292476 GLSO94925 669 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-201ENST00000292476 PLGP00747 810 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-201ENST00000292476 TPOP07202 933 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 NR2C1P13056 603 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 TAS2R20P59543 309 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 POU3F1Q03052 451 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-201ENST00000292476 SLC18B1Q6NT16 456 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 PM20D2Q8IYS1 436 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF454Q8N9F8 522 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 SMAD5Q99717 465 aaKnown RBP14.92□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF552Q9H707 407 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-201ENST00000292476 B3GNT2Q9NY97 397 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 TAS2R8Q9NYW2 309 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 PLA2G3Q9NZ20 509 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 MGAT4AQ9UM21 535 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 B9D1Q9UPM9 204 aa14.92□□□□□ -0.02
CPSF4-201ENST00000292476 DOCK10Q96BY6 2186 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 CPAMD8Q8IZJ3 1885 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 A0A0G2JMM0 328 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 A0A1W2PNR3 127 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 A0A1W2PPB8 328 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 A0A1W2PRS3 328 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 KIR3DP1A8MWS1 328 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 H7C1C5 153 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 XRCC3O43542 346 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 F10P00742 488 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 IL5P05113 134 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 HPNP05981 417 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 CPN1P15169 458 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 IFNGR1P15260 489 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF43P17038 809 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 CDK2P24941 298 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 FAUP35544 74 aaKnown RBP14.91□□□□□ -0.02
CPSF4-201ENST00000292476 RAC3P60763 192 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 LCN6P62502 163 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 PLGLB1Q02325 96 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 SSBP1Q04837 148 aaKnown RBP14.91□□□□□ -0.02
CPSF4-201ENST00000292476 SLC17A1Q14916 467 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 HYAL4Q2M3T9 481 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 TEX30Q5JUR7 227 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF679Q8IYX0 411 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
CPSF4-201ENST00000292476 SPICQ8N5J4 248 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 RNF128Q8TEB7 428 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 THEM6Q8WUY1 208 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 ASB10Q8WXI3 467 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 ORAI1Q96D31 301 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 ELF5Q9UKW6 265 aaPredicted RBP14.91□□□□□ -0.02
CPSF4-201ENST00000292476 ZFYVE26Q68DK2 2539 aa14.91□□□□□ -0.02
CPSF4-201ENST00000292476 IGLV1-36A0A0B4J1U3 117 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 SLC22A23A1A5C7 686 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 ERVH48-1M5A8F1 160 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 SSNA1O43805 119 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 KIR3DL2P43630 455 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 CCL11P51671 97 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 B3GALT5-AS1P59052 145 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 H3F3AP84243 136 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 FOXK1P85037 733 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 ZBTB37Q5TC79 503 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 KCTD18Q6PI47 426 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-201ENST00000292476 YRDCQ86U90 279 aaKnown RBP14.9□□□□□ -0.02
CPSF4-201ENST00000292476 PRSS35Q8N3Z0 413 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 TMEM106AQ96A25 262 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 RBP7Q96R05 134 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF703Q9H7S9 590 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-201ENST00000292476 DLL4Q9NR61 685 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 SNRPGP15A8MWD9 76 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 GMDSO60547 372 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 RFPL3SP0C7P2 107 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF24P17028 368 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 CXCL3P19876 107 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 SOX2P48431 317 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 PER3P56645 1201 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 SNRPD2P62316 118 aaKnown RBP14.9□□□□□ -0.02
CPSF4-201ENST00000292476 GLO1Q04760 184 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 CAMK2DQ13557 499 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 POU4F3Q15319 338 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 WDR38Q5JTN6 314 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 ANKRD16Q6P6B7 361 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 IGFL2Q6UWQ7 119 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 NPDC1Q9NQX5 325 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-201ENST00000292476 KCNG2Q9UJ96 466 aa14.9□□□□□ -0.02
CPSF4-201ENST00000292476 EML6Q6ZMW3 1958 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 TRAV8-7A0A075B6U6 113 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 OPN1LWP04000 364 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 FSTP19883 344 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 POU3F2P20265 443 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-201ENST00000292476 MAGEB1P43366 347 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 P2RY4P51582 365 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 CLDN12P56749 244 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 CARD18P57730 90 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 ZNF766Q5HY98 468 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 GALNTL5Q7Z4T8 443 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 GPAT4Q86UL3 456 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 KDM8Q8N371 416 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 OR6X1Q8NH79 312 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 SF3B5Q9BWJ5 86 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms