RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 TOLLIPQ9H0E2 274 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 CALHM2Q9HA72 323 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 GOLT1BQ9Y3E0 138 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ASCC3Q8N3C0 2202 aaKnown RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 A0A087WV62 115 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF320A2RRD8 509 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 YIF1AO95070 293 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 PIPP12273 146 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 ACHEP22303 614 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 USF1P22415 310 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 F2RP25116 425 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 HSF5Q4G112 596 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 FAM162BQ5T6X4 162 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 FAAP20Q6NZ36 180 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 PAQR6Q6TCH4 344 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC39A11Q8N1S5 342 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 TMEM99Q8N816 258 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 BHLHE23Q8NDY6 225 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 OR2AE1Q8NHA4 323 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 PDXPQ96GD0 296 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 TOE1Q96GM8 510 aaKnown RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 LYSMD1Q96S90 227 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 NTNG1Q9Y2I2 539 aa9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 COA3Q9Y2R0 106 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-201ENST00000291547 MICAL3Q7RTP6 2002 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 OR5H15A6NDH6 313 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 OR5H1A6NKK0 313 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 SDCBPO00560 298 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 DEGS1O15121 323 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 CNIH1O95406 144 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 MMP7P09237 267 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 PI3P19957 117 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 CALCRP30988 508 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 SLC6A11P48066 632 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF85Q03923 595 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 OR8B8Q15620 311 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 CTU2Q2VPK5 515 aaKnown RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF787Q6DD87 383 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF574Q6ZN55 896 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 HTR3DQ70Z44 454 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 NKAIN4Q8IVV8 208 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 UBTD2Q8WUN7 234 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 EMG1Q92979 244 aaKnown RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ACTR3CQ9C0K3 210 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 GABARAPL1Q9H0R8 117 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 TAS2R4Q9NYW5 299 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 CACNA1CQ13936 2221 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 H3BQ06 376 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 WDR1O75083 606 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF250P15622 560 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 DRD1P21728 446 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 IL3RAP26951 378 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 IFITM3Q01628 133 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ETFRF1Q6IPR1 90 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 MFSD12Q6NUT3 480 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 OR2AK2Q8NG84 335 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 OR5AP2Q8NGF4 316 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 GPR137Q96N19 417 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 TAAR2Q9P1P5 351 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 B3GAT1Q9P2W7 334 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 LHX3Q9UBR4 397 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 GDF2Q9UK05 429 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 LOC107986453A0A1B0GWG9 222 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 EIF1BO60739 113 aaKnown RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 CD46P15529 392 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 SUB1P53999 127 aaKnown RBP eCLIP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF750Q32MQ0 723 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 RTN4RL1Q86UN2 441 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 RIMS4Q9H426 269 aaPredicted RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 PLEKHA2Q9HB19 425 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 RNF150Q9ULK6 438 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ARID1AO14497 2285 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 hCG_1809904A0A1W2PP81 198 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 A0A1W2PPE2 198 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 A0A1W2PR64 198 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 A0A1W2PRV1 198 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 ANKRD61A6NGH8 418 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 TERTO14746 1132 aaKnown RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 HSBP1O75506 76 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 GRPP07492 148 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 TGFBR1P36897 503 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 AKR1C3P42330 323 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 LGALS4P56470 323 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 CD81P60033 236 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 RANP62826 216 aaKnown RBP9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 CDKN3Q16667 212 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 Q1RN00 199 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 NCR3LG1Q68D85 454 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 FAM26EQ8N5C1 309 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 SCCPDHQ8NBX0 429 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 OR51M1Q9H341 326 aa9.8□□□□□ -0.84
PKNOX1-201ENST00000291547 DBX1A6NMT0 343 aa9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 E5RGE8 158 aa9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 HS3ST1O14792 307 aa9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 SSSCA1O60232 199 aa9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 ADH4P08319 380 aa9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 TAS2R45P59539 299 aa9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 ZNF528Q3MIS6 628 aa9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 LBHQ53QV2 105 aaPredicted RBP9.79□□□□□ -0.84
PKNOX1-201ENST00000291547 TFAP2EQ6VUC0 442 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms