RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 DYNC2LI1Q8TCX1 351 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 GHSRQ92847 366 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 CCDC120Q96HB5 630 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 DCSTAMPQ9H295 470 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 SLC17A5Q9NRA2 495 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 COQ3Q9NZJ6 369 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 ARPC4-TTLL3A0A0A6YYG9 625 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 OR6C6A6NF89 314 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 HSD11B1P28845 292 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 CHRNB4P30926 498 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 HOXC12P31275 282 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 TUBA1BP68363 451 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 GSG1Q2KHT4 349 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 FDX2Q6P4F2 183 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 TMEM91Q6ZNR0 172 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 USP43Q70EL4 1123 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 TUBA1AQ71U36 451 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 KCNJ15Q99712 375 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 COQ7Q99807 217 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 NOX3Q9HBY0 568 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 TRBV2A0A0J9YWF9 115 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 GABRPO00591 440 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 SRSF10O75494 262 aaKnown RBP16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 C1QL1O75973 258 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 IL32P24001 234 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 OTX1P32242 354 aaPredicted RBP16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 GDI2P50395 445 aaKnown RBP16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 MMP16P51512 607 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 INSL4Q14641 139 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 TRAM1Q15629 374 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 RSPO1Q2MKA7 263 aaPredicted RBP16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 ZNF829Q3KNS6 432 aaPredicted RBP16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 C4orf17Q53FE4 359 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 MTFR2Q6P444 385 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 WDR31Q8NA23 367 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 CPEB3Q8NE35 698 aaKnown RBP16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 KBTBD8Q8NFY9 601 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 TSC22D3Q99576 134 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 OBP2BQ9NPH6 170 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 FRRS1LQ9P0K9 344 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 ATPIF1Q9UII2 106 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 ERRFI1Q9UJM3 462 aaPredicted RBP16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 R4GMQ9 66 aa16.48■□□□□ 0.23
PDLIM3-202ENST00000284770 ZFYVE26Q68DK2 2539 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 NBASA2RRP1 2371 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 TMEM269A0A1B0GVZ9 245 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 OR5H1A6NKK0 313 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 SC5DO75845 299 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 PNPP00491 289 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 CRYGSP22914 178 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 HTR5AP47898 357 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 GALK2Q01415 458 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 FAM27E3Q08E93 113 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 ALKBH1Q13686 389 aaKnown RBP16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 SLC25A35Q3KQZ1 300 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 C22orf42Q6IC83 251 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 MDP1Q86V88 176 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 OR2G2Q8NGZ5 317 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 ASB5Q8WWX0 329 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 SPTSSAQ969W0 71 aa16.47■□□□□ 0.23
PDLIM3-202ENST00000284770 A0A1W2PR80 420 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 RGS9O75916 674 aaPredicted RBP16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 COX5BP10606 129 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 PRKXP51817 358 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 PSMA6P60900 246 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 RPS11P62280 158 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 PLP2Q04941 152 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 MFGE8Q08431 387 aaPredicted RBP16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 KRTAP27-1Q3LI81 207 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 PRSS35Q8N3Z0 413 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 MS4A15Q8N5U1 240 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 SLC7A6Q92536 515 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 ZNF75AQ96N20 296 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 PDCD1LG2Q9BQ51 273 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 FAM206AQ9NX38 181 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 CFAP46Q8IYW2 2715 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 MYO7BQ6PIF6 2116 aa16.46■□□□□ 0.23
PDLIM3-202ENST00000284770 F5H5K5 113 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 GPRIN2O60269 458 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 ZFPL1O95159 310 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 APOC1P02654 83 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 SERPINB10P48595 397 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 CCR9P51686 369 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 LSAMPQ13449 338 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 TIMM23BQ5SRD1 257 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF544Q6NX49 715 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 CATSPERDQ86XM0 798 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF584Q8IVC4 421 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF283Q8N7M2 679 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 STEAP2Q8NFT2 490 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 LILRB4Q8NHJ6 448 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 ABHD4Q8TB40 342 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 S100PBPQ96BU1 408 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 C4orf45Q96LM5 186 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 AMDHD2Q9Y303 409 aa16.46■□□□□ 0.22
PDLIM3-202ENST00000284770 IQCMA0A1B0GVH7 501 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 OR4C45A6NMZ5 311 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 LOC110117498-PIK3R3F6TDL0 507 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 DBHP09172 617 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 APEX1P27695 318 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms