RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 FLI1Q01543 452 aaPredicted RBP16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 MESTQ5EB52 335 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 FDX2Q6P4F2 183 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 OR10G3Q8NGC4 313 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 STK35Q8TDR2 534 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 TSEN15Q8WW01 171 aaKnown RBP16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 DVL3Q92997 716 aaPredicted RBP16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 MARC2Q969Z3 335 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 SLC26A1Q9H2B4 701 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 TAS2R3Q9NYW6 316 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 MYOTQ9UBF9 498 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 LNP1A1A4G5 178 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 OR2F2O95006 317 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 AKR7A3O95154 331 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 UMODP07911 640 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 KIR3DL2P43630 455 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 STARP49675 285 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 OR2F1Q13607 317 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 KDM8Q8N371 416 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 STEAP2Q8NFT2 490 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 OR5M8Q8NGP6 311 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 PHYHIPLQ96FC7 376 aa16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 PTRH2Q9Y3E5 179 aaKnown RBP16.35■□□□□ 0.21
PDLIM3-201ENST00000284767 A0A1B0GTI1 187 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 RAB3DO95716 219 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 RPS27P42677 84 aaKnown RBP16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 FAM166AQ6J272 317 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 DPY19L4Q7Z388 723 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 INTS14Q96SY0 518 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 ATG5Q9H1Y0 275 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 SCPEP1Q9HB40 452 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 PRELID3BQ9Y3B1 194 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 CPAMD8Q8IZJ3 1885 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 RENP00797 406 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 SLC25A4P12235 298 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 CNR1P21554 472 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 ACHEP22303 614 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 POLR2HP52434 150 aaKnown RBP16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 DEFA5Q01523 94 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 MC2RQ01718 297 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 PABPC1L2AQ5JQF8 200 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 EEF1A1P5Q5VTE0 462 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 GLT8D1Q68CQ7 371 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 JMJD6Q6NYC1 403 aaPredicted RBP16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 CCDC36Q8IYA8 594 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 LINC00518Q8N0U6 118 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 FOXN4Q96NZ1 517 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 SLCO5A1Q9H2Y9 848 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 KLRF1Q9NZS2 232 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 B3GALT1Q9Y5Z6 326 aa16.34■□□□□ 0.21
PDLIM3-201ENST00000284767 TRAV36DV7A0A075B6V5 113 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 OR5H14A6NHG9 310 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 BCL2L11O43521 198 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 KLF7O75840 302 aaPredicted RBP16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 PLATP00750 562 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 WDR38Q5JTN6 314 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 SEH1LQ96EE3 360 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 ARL5BQ96KC2 179 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 NKX6-2Q9C056 277 aaPredicted RBP16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 ZNF107Q9UII5 783 aaPredicted RBP16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 TNFSF18Q9UNG2 199 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 R4GN57 208 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 CACNA1CQ13936 2221 aa16.33■□□□□ 0.21
PDLIM3-201ENST00000284767 NPIPB7O75200 414 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 ZFAND5O76080 213 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 FOXK1P85037 733 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 PCOLCEQ15113 449 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 ODF4Q2M2E3 257 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 PDSS1Q5T2R2 415 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 C1orf140Q5VVS0 124 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 GRINAQ7Z429 371 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 SYT4Q9H2B2 425 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 SLC39A1Q9NY26 324 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF175Q9Y473 711 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 CCKBRP32239 447 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 UQCC3Q6UW78 93 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 BPIFCQ8NFQ6 507 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 DEFB126Q9BYW3 111 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 TMEM185BQ9H7F4 350 aa16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 PURGQ9UJV8 347 aaKnown RBP16.33■□□□□ 0.2
PDLIM3-201ENST00000284767 SDK2Q58EX2 2172 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 EML6Q6ZMW3 1958 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 OPN1LWP04000 364 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 FAM74A1Q5RGS3 127 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 LIN54Q6MZP7 749 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 C11orf87Q6NUJ2 197 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 TMED4Q7Z7H5 227 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 OR5L2Q8NGL0 311 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 OTOSQ8NHW6 89 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 RASL10BQ96S79 203 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 EDEM2Q9BV94 578 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 PIGMQ9H3S5 423 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 KCNK15Q9H427 330 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 COMMD9Q9P000 198 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 C19orf25Q9UFG5 118 aaPredicted RBP16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF230Q9UIE0 474 aaPredicted RBP16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 RALGAPA1Q6GYQ0 2036 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 CNTRLQ7Z7A1 2325 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 FAM74A7A6NL05 159 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms