RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 POM121L2Q96KW2 1035 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 GPR78Q96P69 363 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TLCD2A6NGC4 264 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 VAMP5O95183 116 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TBXA2RP21731 343 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 IRS1P35568 1242 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 GPR85P60893 370 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 PAX5Q02548 391 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TCTEX1D1Q8N7M0 179 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 CMBLQ96DG6 245 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 SLC2A9Q9NRM0 540 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 OR1A1Q9P1Q5 309 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 SIAH2O43255 324 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 IQCF3P0C7M6 154 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 HIST1H3AP68431 136 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 DOLPP1Q86YN1 238 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 OR52I1Q8NGK6 324 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF480Q8WV37 535 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ESRP2Q9H6T0 727 aaKnown RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 SCN11AQ9UI33 1791 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF785A8K8V0 405 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 BMPR1BO00238 502 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ANKRD34CP0C6C1 535 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 FOXA1P55317 472 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 FFAR4Q5NUL3 377 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 RHOUQ7L0Q8 258 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 OR5A2Q8NGI9 324 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 OR5D13Q8NGL4 314 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 NEIL1Q96FI4 390 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 RGPD5Q99666 1765 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 A0A1B0GWA3 101 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 HELTA6NFD8 242 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 SMAGPQ0VAQ4 97 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ELOBQ15370 118 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 LEXMQ3ZCV2 418 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ABI3BPQ7Z7G0 1075 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 LYSMD2Q8IV50 215 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 CELF2-AS1Q8N7Q2 184 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ANKRD53Q8N9V6 530 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 LRIT1Q9P2V4 623 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 PHIPQ8WWQ0 1821 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 MEIKINA0A087WXM9 373 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 A0A1B0GTW7 788 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 LY86O95711 162 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 LRRC26Q2I0M4 334 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 OR4F17Q8NGA8 305 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 LANCL2Q9NS86 450 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TAS2R4Q9NYW5 299 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 PRSS56P0CW18 603 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 CD37P11049 281 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TRMT12Q53H54 448 aaKnown RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 GABRG1Q8N1C3 465 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 IP6K3Q96PC2 410 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 FYTTD1Q96QD9 318 aaKnown RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TNFRSF13CQ96RJ3 184 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 CSF3RQ99062 836 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 KCNK15Q9H427 330 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TREX1Q9NSU2 369 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TIMM10BQ9Y5J6 103 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 SMN1Q16637 294 aaKnown RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 EMC4Q5J8M3 183 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 THEM4Q5T1C6 240 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM25Q86YD3 366 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 MFSD4AQ8N468 514 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 PSENENQ9NZ42 101 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SELENOFO60613 162 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ZMAT3Q9HA38 289 aaKnown RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SNED1Q8TER0 1413 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 OR2A25A4D2G3 310 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 CLEC18AA5D8T8 446 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 HSPB2A8KAH6 182 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 FAM166BA8MTA8 275 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SLC35E2P0CK97 266 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SLC25A4P12235 298 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 MGMTP16455 207 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SHC1P29353 583 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 CSNK1DP48730 415 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 PGGT1BP53609 377 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 RPL24P83731 157 aaKnown RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 HSPB2Q16082 182 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 CLEC18CQ8NCF0 446 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 CLRN3Q8NCR9 226 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SLC26A10Q8NG04 563 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 RXFP4Q8TDU9 374 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ERGIC1Q969X5 290 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF775Q96BV0 537 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 GDF2Q9UK05 429 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 BCL2L11O43521 198 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 HPP00738 406 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 NRASP01111 189 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SFTA3P0C7M3 94 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 HOXD13P35453 343 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ACKR1Q16570 336 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 FCRL6Q6DN72 434 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 GATA6Q92908 595 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SPOCK3Q9BQ16 436 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM208Q9BTX3 173 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM147Q9BVK8 224 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 CACNA1GO43497 2377 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms