RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 CHAC2Q8WUX2 184 aa18.48■□□□□ 0.55
YBX3-202ENST00000279550 EXTL1Q92935 676 aa18.48■□□□□ 0.55
YBX3-202ENST00000279550 ZC3HAV1LQ96H79 300 aaKnown RBP18.48■□□□□ 0.55
YBX3-202ENST00000279550 ZNF416Q9BWM5 594 aa18.48■□□□□ 0.55
YBX3-202ENST00000279550 PBOV1Q9GZY1 135 aa18.48■□□□□ 0.55
YBX3-202ENST00000279550 FOXD3Q9UJU5 478 aaPredicted RBP18.48■□□□□ 0.55
YBX3-202ENST00000279550 A0A0B4J293 547 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 ZNF716A6NP11 495 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 ZNF878C9JN71 531 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 K7EM74 188 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 FSTP19883 344 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 DCTDP32321 178 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 ENDOGQ14249 297 aaKnown RBP18.47■□□□□ 0.55
YBX3-202ENST00000279550 ZNF169Q14929 603 aaPredicted RBP18.47■□□□□ 0.55
YBX3-202ENST00000279550 SLC10A1Q14973 349 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 SLC36A2Q495M3 483 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 AGAP6Q5VW22 663 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 BAIAP2L2Q6UXY1 529 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 ELMOD2Q8IZ81 293 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 NABP1Q96AH0 204 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 SF3B5Q9BWJ5 86 aaKnown RBP18.47■□□□□ 0.55
YBX3-202ENST00000279550 ABCG5Q9H222 651 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 SLC6A15Q9H2J7 730 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 KCNK15Q9H427 330 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 ZDHHC11Q9H8X9 412 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 ACKR4Q9NPB9 350 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 STEAP1Q9UHE8 339 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 FOXJ3Q9UPW0 622 aa18.47■□□□□ 0.55
YBX3-202ENST00000279550 TNRC6AQ8NDV7 1962 aaKnown RBP18.47■□□□□ 0.55
YBX3-202ENST00000279550 ARPC4-TTLL3A0A0A6YYG9 625 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 HOXD11P31277 338 aaPredicted RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 SRP9P49458 86 aaKnown RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 MMP15P51511 669 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 TMEM244Q5VVB8 128 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 ABLIM2Q6H8Q1 611 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 Q6ZS92 163 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 C20orf196Q8IYI0 205 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 OR51A2Q8NGJ7 313 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 ABHD17AQ96GS6 310 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 AUNIPQ9H7T9 357 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 FLVCR1Q9Y5Y0 555 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 ETV7Q9Y603 341 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 DHHO43323 396 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 ITGA5P08648 1049 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 UBCP0CG48 685 aaKnown RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 TMIGD3P0DMS9 266 aaPredicted RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 CFPP27918 469 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 DDOSTP39656 456 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 PRKXP51817 358 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 TPTEP56180 551 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 PSMA6P60900 246 aaKnown RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 CXADRP78310 365 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 PITPNAQ00169 270 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 PLPP7Q8NBV4 271 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 GCDHQ92947 438 aaPredicted RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 ZNF837Q96EG3 531 aaPredicted RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 ZNF845Q96IR2 970 aaPredicted RBP18.46■□□□□ 0.55
YBX3-202ENST00000279550 MRI1Q9BV20 369 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 RNF121Q9H920 327 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 NLKQ9UBE8 527 aa18.46■□□□□ 0.55
YBX3-202ENST00000279550 MED19A0JLT2 244 aaPredicted RBP18.45■□□□□ 0.54
YBX3-202ENST00000279550 MEIOCA2RUB1 952 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 TTLL8A6PVC2 850 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 GSTZ1O43708 216 aaPredicted RBP18.45■□□□□ 0.54
YBX3-202ENST00000279550 CD2P06729 351 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 NR2C1P13056 603 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 ZNF24P17028 368 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 MSR1P21757 451 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 PTH2RP49190 550 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 FAM166AQ6J272 317 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 DUSP18Q8NEJ0 188 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 OR51D1Q8NGF3 324 aa18.45■□□□□ 0.54
YBX3-202ENST00000279550 ZCCHC14Q8WYQ9 949 aaKnown RBP18.45■□□□□ 0.54
YBX3-202ENST00000279550 CACNA1AO00555 2505 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 A0A1B0GTI1 187 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 FAM240BA0A1B0GVZ2 78 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 SLC17A2O00624 439 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 CTDSPLO15194 276 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 ITGB2P05107 769 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 SLC2A1P11166 492 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 BTCP35070 178 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 LHX2P50458 406 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 EFNB2P52799 333 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 ART1P52961 327 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 LSM6P62312 80 aaKnown RBP18.44■□□□□ 0.54
YBX3-202ENST00000279550 TAF13Q15543 124 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 RAB11BQ15907 218 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 BIVMQ86UB2 503 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 AKAP14Q86UN6 197 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 RBMXL3Q8N7X1 1067 aaKnown RBP18.44■□□□□ 0.54
YBX3-202ENST00000279550 SLC25A28Q96A46 364 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 HAVCR1Q96D42 359 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 RBM24Q9BX46 236 aaKnown RBP18.44■□□□□ 0.54
YBX3-202ENST00000279550 ULBP2Q9BZM5 246 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 DEFB127Q9H1M4 99 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 NUFIP1Q9UHK0 495 aaKnown RBP18.44■□□□□ 0.54
YBX3-202ENST00000279550 NCOR2Q9Y618 2525 aa18.44■□□□□ 0.54
YBX3-202ENST00000279550 CD37P11049 281 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 CDK2P24941 298 aa18.43■□□□□ 0.54
YBX3-202ENST00000279550 HSD11B1P28845 292 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms