RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZNF304Q9HCX3 659 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 SCDO00767 359 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 MED6O75586 246 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 HOXB5P09067 269 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 INSM1Q01101 510 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 KRBOX4Q5JUW0 171 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF776Q68DI1 518 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 FAM166AQ6J272 317 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 OR52N4Q8NGI2 321 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 AKR1E2Q96JD6 320 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 SPSB2Q99619 263 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 NAA11Q9BSU3 229 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 METTL8Q9H825 291 aaKnown RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 GDF2Q9UK05 429 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 RP1P56715 2156 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 ADH1BP00325 375 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 SFTPBP07988 381 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 HLA-DOBP13765 273 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 ABOP16442 354 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 CPT2P23786 658 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 NAA40Q86UY6 237 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF101Q8IZC7 436 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 MMABQ96EY8 250 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF587Q96SQ5 575 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-202ENST00000273342 NRIP2Q9BQI9 281 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 EDEM2Q9BV94 578 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 NXF5Q9H1B4 397 aaKnown RBP11.56□□□□□ -0.56
COL8A1-202ENST00000273342 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 C2orf74A8MZ97 194 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 H0YIG0 161 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 RAB27BO00194 218 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 SDCBPO00560 298 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF264O43296 627 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 TNFSF14O43557 240 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 CD74P04233 296 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 SNRNP70P08621 437 aaKnown RBP11.56□□□□□ -0.56
COL8A1-202ENST00000273342 MST1LQ2TV78 715 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 RPL7L1Q6DKI1 246 aaKnown RBP11.56□□□□□ -0.56
COL8A1-202ENST00000273342 LPCAT3Q6P1A2 487 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 TAF8Q7Z7C8 310 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 PAQR4Q8N4S7 273 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-202ENST00000273342 OR13C9Q8NGT0 318 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 RNF128Q8TEB7 428 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 ACKR4Q9NPB9 350 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 CYTL1Q9NRR1 136 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 SLC5A6Q9Y289 635 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 PCDHGA1Q9Y5H4 931 aa11.56□□□□□ -0.56
COL8A1-202ENST00000273342 PCNX3Q9H6A9 2034 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 CABIN1Q9Y6J0 2220 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 TMEM269A0A1B0GVZ9 245 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 C2orf72A6NCS6 295 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 FGF16O43320 207 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 S100A9P06702 114 aaKnown RBP11.55□□□□□ -0.56
COL8A1-202ENST00000273342 PNMTP11086 282 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 LPAR6P43657 344 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 POLR2GP62487 172 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL8A1-202ENST00000273342 PJVKQ0ZLH3 352 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 HABP2Q14520 560 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-202ENST00000273342 DCXRQ7Z4W1 244 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 EDAQ92838 391 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 FOXQ1Q9C009 403 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 BANF2Q9H503 90 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 A0A1W2PP11 408 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 METTL21EPA6NDL7 271 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 GNRH1P01148 92 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 APODP05090 189 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 HNRNPA1P09651 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL8A1-202ENST00000273342 FAM157CP0CG43 387 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 PPICP45877 212 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 GPR3P46089 330 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 SKP2Q13309 424 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 ISXQ2M1V0 245 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 COMMD2Q86X83 199 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 BMFQ96LC9 184 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 WDR92Q96MX6 357 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 HHLA2Q9UM44 414 aa11.55□□□□□ -0.56
COL8A1-202ENST00000273342 PRSS37A4D1T9 235 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 RNASEK-C17orf49H0YIS7 233 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 UTS2O95399 124 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 SLC2A1P11166 492 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 CD79AP11912 226 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 IL11P20809 199 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 SCAND1P57086 179 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 OR2B8PP59922 312 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 DCDP81605 110 aaKnown RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 UNC119Q13432 240 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 GPM6BQ13491 265 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 RAB32Q13637 225 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 MICBQ29980 383 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 FAM76BQ5HYJ3 339 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 LCN10Q6JVE6 187 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 OOSP2Q86WS3 158 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF615Q8N8J6 731 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 OR4K15Q8NH41 348 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 SECTM1Q8WVN6 248 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 PMM1Q92871 262 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 GSN-AS1Q9NRJ2 163 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 UBQLN4Q9NRR5 601 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms