RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 NOL4LQ96MY1 436 aaPredicted RBP14.13□□□□□ -0.15
CTDSP1-201ENST00000273062 SYT4Q9H2B2 425 aa14.13□□□□□ -0.15
CTDSP1-201ENST00000273062 FBXO7Q9Y3I1 522 aa14.13□□□□□ -0.15
CTDSP1-201ENST00000273062 DYRK1BQ9Y463 629 aa14.13□□□□□ -0.15
CTDSP1-201ENST00000273062 A0A087WUJ7 227 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 TRGC1P0CF51 173 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 AKR1C4P17516 323 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 SEC13P55735 322 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 TAS2R19P59542 299 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 RUNX3Q13761 415 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 ELOBQ15370 118 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 ARHGAP11AQ6P4F7 1023 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF765Q7L2R6 523 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 FRZBQ92765 325 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 SLC5A7Q9GZV3 580 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 SLC25A31Q9H0C2 315 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 PARP11Q9NR21 331 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 A0A087WZY1 265 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 CENPVL1A0A0U1RR11 272 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 RIIAD1A6NNX1 92 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF705GA8MUZ8 300 aaPredicted RBP14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 TMPRSS11DO60235 418 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 FGF7P21781 194 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 SNCAP37840 140 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 PDGFRLQ15198 375 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 TOMM20Q15388 145 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 SLC35F2Q8IXU6 374 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 OR51A4Q8NGJ6 313 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 GNRHR2Q96P88 292 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 PHB2Q99623 299 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 PRSS27Q9BQR3 290 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 CLDND1Q9NY35 253 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 THAP10Q9P2Z0 257 aaPredicted RBP14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 MSRAQ9UJ68 235 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 TRPM6Q9BX84 2022 aa14.12□□□□□ -0.15
CTDSP1-201ENST00000273062 SPARCP09486 303 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 MSX1P28360 303 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 TLX1P31314 330 aaPredicted RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 CDK3Q00526 305 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 C2orf27AQ580R0 203 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 HIST2H3PS2Q5TEC6 136 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 AGBL4Q5VU57 503 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 NXPE4Q6UWF7 544 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 SLC25A42Q86VD7 318 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF761Q86XN6 746 aaPredicted RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 ACOT4Q8N9L9 421 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 FGF14Q92915 247 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 MTIF3Q9H2K0 278 aaKnown RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 A0A1W2PP55 124 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 CYB5BO43169 146 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 CD81P60033 236 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 JOSD1Q15040 202 aaPredicted RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 TOMM34Q15785 309 aaPredicted RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 TMEM35AQ53FP2 167 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 PARM1Q6UWI2 310 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 SYS1Q8N2H4 156 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 CPEB3Q8NE35 698 aaKnown RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 DNAJA3Q96EY1 480 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 COX14Q96I36 57 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 SNX22Q96L94 193 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 LINC00615Q96LM1 132 aaPredicted RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 TAC3Q9UHF0 121 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF346Q9UL40 294 aaKnown RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 GOLGA4Q13439 2230 aaKnown RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 A0A1B0GVT2 93 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 C1QTNF3-AMACRE9PGA6 284 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 TSPAN15O95858 294 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 IL2RAP01589 272 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 FRKP42685 505 aaPredicted RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 ACTA2P62736 377 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 ACTG2P63267 376 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 DUSP2Q05923 314 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 SLC22A6Q4U2R8 563 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 PRAMEF14Q5SWL7 426 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 AMZ2Q86W34 360 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 OR4K13Q8NH42 304 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 TCEAL2Q9H3H9 227 aaPredicted RBP14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 CAPN10Q9HC96 672 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 SLC2A8Q9NY64 477 aa14.11□□□□□ -0.15
CTDSP1-201ENST00000273062 DOCK8Q8NF50 2099 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 FEZF1A0PJY2 475 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 ERCC1P07992 297 aaPredicted RBP14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 HKR1P10072 659 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 ZNF616Q08AN1 781 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 TCEA2Q15560 299 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 ETFRF1Q6IPR1 90 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 LMF1Q96S06 567 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 CNN2Q99439 309 aaKnown RBP14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 HDAC8Q9BY41 377 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 GPR34Q9UPC5 381 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 POMT1Q9Y6A1 747 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 ELOA3CA0A087WX78 387 aaPredicted RBP14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 C1QL1O75973 258 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 AIFM1O95831 613 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 KHKP50053 298 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 NPY4RP50391 375 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 ELOCQ15369 112 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 SAPCD1Q5SSQ6 148 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 C17orf64Q86WR6 236 aa14.1□□□□□ -0.15
CTDSP1-201ENST00000273062 OR52E2Q8NGJ4 325 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms