RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 ZMAT3Q9HA38 289 aaKnown RBP12.78□□□□□ -0.36
SOD1-201ENST00000270142 EFCAB1Q9HAE3 211 aa12.78□□□□□ -0.36
SOD1-201ENST00000270142 ABCD2Q9UBJ2 740 aa12.78□□□□□ -0.36
SOD1-201ENST00000270142 RPS6KA6Q9UK32 745 aa12.78□□□□□ -0.36
SOD1-201ENST00000270142 FAM32AQ9Y421 112 aaKnown RBP12.78□□□□□ -0.36
SOD1-201ENST00000270142 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 F5H5P2 479 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 PPP1R3DO95685 299 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 RNASE1P07998 156 aaKnown RBP12.77□□□□□ -0.37
SOD1-201ENST00000270142 SELEP16581 610 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 CRABP1P29762 137 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 PMELP40967 661 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 SRP9P49458 86 aaKnown RBP12.77□□□□□ -0.37
SOD1-201ENST00000270142 GNB2P62879 340 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 PRR31Q5SQ13 230 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 FAM201AQ5SY85 155 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 PGM2L1Q6PCE3 622 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 DNM1P34Q6PK57 102 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 SMARCD3Q6STE5 483 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 SHISA2Q6UWI4 295 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 BTNL3Q6UXE8 466 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 FAM86B1Q8N7N1 296 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 OR52E2Q8NGJ4 325 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 OR52J3Q8NH60 311 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 TAF15Q92804 592 aaKnown RBP eCLIP12.77□□□□□ -0.37
SOD1-201ENST00000270142 DACT3Q96B18 629 aaPredicted RBP12.77□□□□□ -0.37
SOD1-201ENST00000270142 C7orf34Q96L11 122 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 DHRS1Q96LJ7 313 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 TMEM246Q9BRR3 403 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 KRCC1Q9NPI7 259 aaPredicted RBP12.77□□□□□ -0.37
SOD1-201ENST00000270142 B9D1Q9UPM9 204 aa12.77□□□□□ -0.37
SOD1-201ENST00000270142 TRAV40A0A0B4J280 105 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 KCNAB3O43448 404 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 CCDC22O60826 627 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 COX10Q12887 443 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 SLC9A3R2Q15599 337 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 ZNF181Q2M3W8 571 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 RSPO1Q2MKA7 263 aaPredicted RBP12.76□□□□□ -0.37
SOD1-201ENST00000270142 KRTAP27-1Q3LI81 207 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 ZNF404Q494X3 552 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 GLYATQ6IB77 296 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 LEG1Q6P5S2 330 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 LRRN1Q6UXK5 716 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 COLCA1Q6ZS62 124 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 LINC00346Q8IVM7 164 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 FANK1Q8TC84 345 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 RAB40AQ8WXH6 277 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 UPRTQ96BW1 309 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 NEIL1Q96FI4 390 aaPredicted RBP12.76□□□□□ -0.37
SOD1-201ENST00000270142 ERMAPQ96PL5 475 aaPredicted RBP12.76□□□□□ -0.37
SOD1-201ENST00000270142 FUZQ9BT04 418 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 ZNF696Q9H7X3 374 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 UNKLQ9H9P5 680 aaKnown RBP12.76□□□□□ -0.37
SOD1-201ENST00000270142 MIOXQ9UGB7 285 aa12.76□□□□□ -0.37
SOD1-201ENST00000270142 CMYA5Q8N3K9 4069 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 MDFIC2A0A1B0GVS7 189 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 CLDN34H7C241 214 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 NDUFAB1O14561 156 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 PLATP00750 562 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 HLA-DPB1P04440 258 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 PPIAL4GP0DN37 164 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 CPT2P23786 658 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 FPR3P25089 353 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
SOD1-201ENST00000270142 PSME3P61289 254 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 MAB21L1Q13394 359 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 SLC18B1Q6NT16 456 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 CFAP77Q6ZQR2 320 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 C9orf139Q6ZV77 190 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 SLC26A10Q8NG04 563 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 OR8B3Q8NGG8 313 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 SLC25A28Q96A46 364 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 OR8B2Q96RD0 313 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 NMNAT3Q96T66 252 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 OR52D1Q9H346 318 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 SRA1Q9HD15 236 aaKnown RBP12.75□□□□□ -0.37
SOD1-201ENST00000270142 DCAF13Q9NV06 445 aaKnown RBP12.75□□□□□ -0.37
SOD1-201ENST00000270142 TMEM100Q9NV29 134 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 SAMD4AQ9UPU9 718 aaKnown RBP12.75□□□□□ -0.37
SOD1-201ENST00000270142 V9GYQ6 96 aa12.75□□□□□ -0.37
SOD1-201ENST00000270142 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 LRRC30A6NM36 301 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 F5H5K5 113 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 FSTL3O95633 263 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 RENP00797 406 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 ACSM4P0C7M7 580 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 HIST1H1CP16403 213 aaKnown RBP12.74□□□□□ -0.37
SOD1-201ENST00000270142 SLC6A6P31641 620 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 MTNR1AP48039 350 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 HOXA4Q00056 320 aaPredicted RBP12.74□□□□□ -0.37
SOD1-201ENST00000270142 GK2Q14410 553 aaPredicted RBP12.74□□□□□ -0.37
SOD1-201ENST00000270142 RFX4Q33E94 735 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 NAA40Q86UY6 237 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 C1orf87Q8N0U7 546 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 OR4K13Q8NH42 304 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 PLEKHA8Q96JA3 519 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 PITX2Q99697 317 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms