RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TMED7-TICAM2A0A0A6YYA0 188 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 OR5K4A6NMS3 321 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 CTHP32929 405 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 C1orf100Q5SVJ3 147 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 UQCC3Q6UW78 93 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 RNF144BQ7Z419 303 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 BHLHE23Q8NDY6 225 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 RRNAD1Q96FB5 475 aaKnown RBP24.56■■□□□ 1.52
CBX4-201ENST00000269397 SPACA5Q96QH8 159 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 TBL1XR1Q9BZK7 514 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 SLC2A8Q9NY64 477 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 RHBDD3Q9Y3P4 386 aa24.56■■□□□ 1.52
CBX4-201ENST00000269397 TCRBV21S2A2A0A5A6 115 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 ZNF98A6NK75 572 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 PVALBP20472 110 aaPredicted RBP24.55■■□□□ 1.52
CBX4-201ENST00000269397 PSMB6P28072 239 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 SLC6A8P48029 635 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 ADIPOR1Q96A54 375 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 SLC46A1Q96NT5 459 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 NDRG3Q9UGV2 375 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 MKL2Q9ULH7 1088 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 KCNK7Q9Y2U2 307 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 RAB19A4D1S5 217 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 C1orf140Q5VVS0 124 aa24.55■■□□□ 1.52
CBX4-201ENST00000269397 ATXN7L1Q9ULK2 861 aaPredicted RBP24.55■■□□□ 1.52
CBX4-201ENST00000269397 IGKV1D-43A0A0B4J1Z2 117 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 CRHP06850 196 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 ZNF823P16415 610 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 HLA-GP17693 338 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 PTCRAQ6ISU1 281 aaPredicted RBP24.54■■□□□ 1.52
CBX4-201ENST00000269397 ZNF629Q9UEG4 869 aaPredicted RBP24.54■■□□□ 1.52
CBX4-201ENST00000269397 A0A0A6YYH2 397 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 A6NJ64 397 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 PLPP3O14495 311 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 IFNA6P05013 189 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 GFERP55789 205 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 H3F3CQ6NXT2 135 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 LYPD6Q86Y78 171 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 ARMC10Q8N2F6 343 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 FOXQ1Q9C009 403 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 FBRSQ9HAH7 460 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 TREM1Q9NP99 234 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 CYB5R1Q9UHQ9 305 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 RAB22AQ9UL26 194 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 PCDH15Q96QU1 1955 aa24.54■■□□□ 1.52
CBX4-201ENST00000269397 FRG2CA6NGY1 282 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 H0YIG0 161 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 SEMA4FO95754 770 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 CD37P11049 281 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 FZD2Q14332 565 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 ZNF813Q6ZN06 617 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 NICN1Q9BSH3 213 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 LANCL2Q9NS86 450 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 ZNF107Q9UII5 783 aaPredicted RBP24.53■■□□□ 1.52
CBX4-201ENST00000269397 ATG2AQ2TAZ0 1938 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 DXOO77932 396 aaKnown RBP24.53■■□□□ 1.52
CBX4-201ENST00000269397 THEGLP0DJG4 465 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 RABIFP47224 123 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 NKAPLQ5M9Q1 402 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 NUP54Q7Z3B4 507 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 ZDHHC22Q8N966 263 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 CPNE2Q96FN4 548 aaPredicted RBP24.53■■□□□ 1.52
CBX4-201ENST00000269397 SLC5A6Q9Y289 635 aa24.53■■□□□ 1.52
CBX4-201ENST00000269397 KLF2Q9Y5W3 355 aaPredicted RBP24.53■■□□□ 1.52
CBX4-201ENST00000269397 LOC390937A0A1W2PQ73 354 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 BLACEA4D250 179 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 VSIG8P0DPA2 414 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 PI3P19957 117 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 NPBWR1P48145 328 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 TTLL10Q6ZVT0 673 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 ADAT3Q96EY9 351 aaPredicted RBP24.52■■□□□ 1.52
CBX4-201ENST00000269397 TCTN2Q96GX1 697 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 TGM7Q96PF1 710 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 FGF16O43320 207 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 NUDT21O43809 227 aaKnown RBP24.52■■□□□ 1.52
CBX4-201ENST00000269397 MT-ATP6P00846 226 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 H2AFB1P0C5Y9 115 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 PGCP20142 388 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 AIMP2Q13155 320 aaKnown RBP24.52■■□□□ 1.52
CBX4-201ENST00000269397 TMEM200AQ86VY9 491 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 HIST2H2ABQ8IUE6 130 aaPredicted RBP24.52■■□□□ 1.52
CBX4-201ENST00000269397 ZSCAN4Q8NAM6 433 aaPredicted RBP24.52■■□□□ 1.52
CBX4-201ENST00000269397 OR4A4PQ8NGN8 299 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 ST7LQ8TDW4 575 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 ADAMTS18Q8TE60 1221 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 RNF126Q9BV68 326 aa24.52■■□□□ 1.52
CBX4-201ENST00000269397 ESRP2Q9H6T0 727 aaKnown RBP24.52■■□□□ 1.52
CBX4-201ENST00000269397 IGHV5-51A0A0C4DH38 117 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 C2orf72A6NCS6 295 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 H0YIZ8 118 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 IGHV4-34P06331 123 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 TPT1P13693 172 aaKnown RBP24.51■■□□□ 1.51
CBX4-201ENST00000269397 EFNA3P52797 238 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 PNLIPRP2P54317 469 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 PHF19Q5T6S3 580 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 COX15Q7KZN9 410 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 BAP18Q8IXM2 172 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 SLC26A10Q8NG04 563 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 OR10R2Q8NGX6 335 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 ZNF721Q8TF20 911 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms