RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SCNM1Q9BWG6 230 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 ZMAT3Q9HA38 289 aaKnown RBP8.25□□□□□ -1.09
SSR3-201ENST00000265044 EML6Q6ZMW3 1958 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 AIPO00170 330 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 HRGP04196 525 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 EIF4EP06730 217 aaKnown RBP8.25□□□□□ -1.09
SSR3-201ENST00000265044 FCGR2AP12318 317 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 ZNF239Q16600 458 aaKnown RBP8.25□□□□□ -1.09
SSR3-201ENST00000265044 ZNF774Q6NX45 483 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 MYO7BQ6PIF6 2116 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 CD200R1LQ6Q8B3 271 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 C19orf48Q6RUI8 117 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 CFAP77Q6ZQR2 320 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 NANOS1Q8WY41 292 aaKnown RBP8.25□□□□□ -1.09
SSR3-201ENST00000265044 PIGCQ92535 297 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 FAM3DQ96BQ1 224 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 MMP28Q9H239 520 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 SLC7A11Q9UPY5 501 aa8.25□□□□□ -1.09
SSR3-201ENST00000265044 SHISA3A0PJX4 238 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 PRR32B1ATL7 298 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 J3QRE1 110 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 NME2P1O60361 137 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 CCNKO75909 580 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 CYB5AP00167 134 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 HLA-HP01893 362 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 NME2P22392 152 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 IL32P24001 234 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 NBL1P41271 181 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 CCR9P51686 369 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 MRPL49Q13405 166 aaKnown RBP8.24□□□□□ -1.09
SSR3-201ENST00000265044 BAK1Q16611 211 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 TSPO2Q5TGU0 170 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 OR10K2Q6IF99 312 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 C3P1Q6ZMU1 363 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 MRPL21Q7Z2W9 205 aaKnown RBP8.24□□□□□ -1.09
SSR3-201ENST00000265044 RNF133Q8WVZ7 376 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 DDOQ99489 341 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 PROK2Q9HC23 129 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 TMEM138Q9NPI0 162 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 SPATA2Q9UM82 520 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 LYRM1O43325 122 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 ACTL6AO96019 429 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 IGHMP01871 453 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 IFNA6P05013 189 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 YES1P07947 543 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 DBHP09172 617 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 GSTT2BP0CG30 244 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 ZNF93P35789 620 aaPredicted RBP8.24□□□□□ -1.09
SSR3-201ENST00000265044 SFRP4Q6FHJ7 346 aaPredicted RBP8.24□□□□□ -1.09
SSR3-201ENST00000265044 FAM180AQ6UWF9 173 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 TEX19Q8NA77 164 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 C15orf40Q8WUR7 153 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 MRI1Q9BV20 369 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 OR2B2Q9GZK3 357 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 IFT46Q9NQC8 304 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 STEAP1Q9UHE8 339 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 CYB5R1Q9UHQ9 305 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 CSAG2Q9Y5P2 127 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 A0A087WV48 116 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 ORC5O43913 435 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 CRTAPO75718 401 aaPredicted RBP8.24□□□□□ -1.09
SSR3-201ENST00000265044 PTTG1O95997 202 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 TNFSF10P50591 281 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 BCAP31P51572 246 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 PSMA6P60900 246 aaKnown RBP8.24□□□□□ -1.09
SSR3-201ENST00000265044 CLN3Q13286 438 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 RNPS1Q15287 305 aaKnown RBP8.24□□□□□ -1.09
SSR3-201ENST00000265044 TMEM53Q6P2H8 277 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 EXD3Q8N9H8 876 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 ACBD4Q8NC06 268 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 PIGTQ969N2 578 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 BORCS8Q96FH0 119 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 SORCS2Q96PQ0 1159 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 KCNJ15Q99712 375 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 CDH20Q9HBT6 801 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 PIGLQ9Y2B2 252 aa8.24□□□□□ -1.09
SSR3-201ENST00000265044 TRAV8-7A0A075B6U6 113 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 LOC100509620A0A075B734 347 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 C5orf49A4QMS7 147 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 NPIPB13A6NJU9 1138 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 B4DXG7 233 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 NPIPB4C9JG80 1138 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 SSNA1O43805 119 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 RAD51DO75771 328 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 ACSM4P0C7M7 580 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 KIR3DL2P43630 455 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 SNU13P55769 128 aaKnown RBP8.23□□□□□ -1.09
SSR3-201ENST00000265044 UBE2NLQ5JXB2 153 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 SLC25A47Q6Q0C1 308 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 METAP1DQ6UB28 335 aaPredicted RBP8.23□□□□□ -1.09
SSR3-201ENST00000265044 TRILQ7L0X0 811 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 AKAP14Q86UN6 197 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 PRSS35Q8N3Z0 413 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 ZNF485Q8NCK3 441 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 BHLHE23Q8NDY6 225 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 CHPT1Q8WUD6 406 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 GCDHQ92947 438 aaPredicted RBP8.23□□□□□ -1.09
SSR3-201ENST00000265044 MAP6Q96JE9 813 aa8.23□□□□□ -1.09
SSR3-201ENST00000265044 A0A1W2PR80 420 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms