RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PTCRAQ6ISU1 281 aaPredicted RBP16.38■□□□□ 0.21
COL5A3-201ENST00000264828 COL22A1Q8NFW1 1626 aaPredicted RBP16.38■□□□□ 0.21
COL5A3-201ENST00000264828 NID1P14543 1247 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 SIGLECL1Q8N7X8 197 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 TMEM178AQ8NBL3 297 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 RDH5Q92781 318 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 OR51I2Q9H344 312 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 A0A096LPE4 126 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 A0A1W2PPZ6 126 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 ZAR1LA6NP61 321 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 CD3DP04234 171 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 DTYMKP23919 212 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 PCBP3P57721 371 aaKnown RBP16.37■□□□□ 0.21
COL5A3-201ENST00000264828 FCRL6Q6DN72 434 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 DHRS4L2Q6PKH6 230 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 TMEM179BQ7Z7N9 219 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 SLC24A4Q8NFF2 622 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 SLC37A2Q8TED4 501 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 DEFB127Q9H1M4 99 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 CMC2Q9NRP2 79 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 TRIM77I1YAP6 450 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 EIF4E2O60573 245 aaKnown RBP16.37■□□□□ 0.21
COL5A3-201ENST00000264828 ICOSLGO75144 302 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 OR5G3P0C626 314 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 PSMB6P28072 239 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 SUB1P53999 127 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL5A3-201ENST00000264828 FAM174AQ8TBP5 190 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 TSLPQ969D9 159 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 MAGT1Q9H0U3 335 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 TBC1D29Q9UFV1 150 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 LRP3O75074 770 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 GPR12P47775 334 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 METRNLQ641Q3 311 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 ZNF787Q6DD87 383 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 ZNF251Q9BRH9 671 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 GPR84Q9NQS5 396 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 ZNF230Q9UIE0 474 aaPredicted RBP16.37■□□□□ 0.21
COL5A3-201ENST00000264828 A0A1W2PPH5 198 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 C5orf49A4QMS7 147 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 C4orf47A7E2U8 309 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 OR4E1P0C645 316 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 NME1P15531 152 aaKnown RBP16.37■□□□□ 0.21
COL5A3-201ENST00000264828 SCPEP1Q9HB40 452 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 PLSCR3Q9NRY6 295 aa16.37■□□□□ 0.21
COL5A3-201ENST00000264828 SLC25A6P12236 298 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 ANKRD16Q6P6B7 361 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 FAM26EQ8N5C1 309 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 SPPL3Q8TCT6 385 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 DAPP1Q9UN19 280 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 FGF17O60258 216 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 TBXA2RP21731 343 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 AKR1C3P42330 323 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 CSN1S1P47710 185 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 EMDP50402 254 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 OR10X1Q8NGY0 326 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 MARCH1Q8TCQ1 289 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 ING1Q9UK53 422 aaPredicted RBP16.36■□□□□ 0.21
COL5A3-201ENST00000264828 SLC17A4Q9Y2C5 497 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 TCRBV5S2A0A599 114 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 CLDN20P56880 219 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 OLIG1Q8TAK6 271 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 ATF6BQ99941 703 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 SLC22A13Q9Y226 551 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 IGLV3-10A0A075B6K4 115 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 ARPC3O15145 178 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 TMPRSS11DO60235 418 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 LAIR1Q6GTX8 287 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 DYNC2LI1Q8TCX1 351 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 BARX1Q9HBU1 254 aaPredicted RBP16.36■□□□□ 0.21
COL5A3-201ENST00000264828 G3V3Q6 166 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 ABLIM3O94929 683 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 LHFPL2Q6ZUX7 228 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 PATE1Q8WXA2 126 aa16.36■□□□□ 0.21
COL5A3-201ENST00000264828 TO15178 435 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 RAB13P51153 203 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 RPL18Q07020 188 aaKnown RBP16.35■□□□□ 0.21
COL5A3-201ENST00000264828 EXT1Q16394 746 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 LRRTM1Q86UE6 522 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 EDAQ92838 391 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 BOD1Q96IK1 185 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 CDCA4Q9BXL8 241 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 C19orf53Q9UNZ5 99 aaPredicted RBP16.35■□□□□ 0.21
COL5A3-201ENST00000264828 DEFB108BQ8NET1 73 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 ZDHHC5Q9C0B5 715 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 DUSP22Q9NRW4 184 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 SH2D1BO14796 132 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 CT45A10P0DMU9 189 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 PRR27Q6MZM9 219 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 RTN4RL1Q86UN2 441 aaPredicted RBP16.35■□□□□ 0.21
COL5A3-201ENST00000264828 OR10G3Q8NGC4 313 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 OR5AP2Q8NGF4 316 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 ACTR3CQ9C0K3 210 aaPredicted RBP16.35■□□□□ 0.21
COL5A3-201ENST00000264828 FGF22Q9HCT0 170 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 CDC20BQ86Y33 519 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 RHNO1Q9BSD3 238 aa16.35■□□□□ 0.21
COL5A3-201ENST00000264828 STRAPQ9Y3F4 350 aaKnown RBP16.35■□□□□ 0.21
COL5A3-201ENST00000264828 OR7C2O60412 319 aa16.34■□□□□ 0.21
COL5A3-201ENST00000264828 DCTDP32321 178 aa16.34■□□□□ 0.21
COL5A3-201ENST00000264828 CISD2Q8N5K1 135 aaKnown RBP16.34■□□□□ 0.21
COL5A3-201ENST00000264828 C12orf10Q9HB07 376 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms