RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ALKBH2Q6NS38 261 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 C16orf87Q6PH81 154 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 DNM1P34Q6PK57 102 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 HDDC2Q7Z4H3 204 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 OR2V1Q8NHB1 315 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 LILRB1Q8NHL6 650 aaPredicted RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 INTS14Q96SY0 518 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 MRPL13Q9BYD1 178 aaKnown RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 NXF2Q9GZY0 626 aaKnown RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 WDR76Q9H967 626 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 EXOSC4Q9NPD3 245 aaKnown RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 TIGARQ9NQ88 270 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 CRNNQ9UBG3 495 aaPredicted RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 PROCRQ9UNN8 238 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 PEX16Q9Y5Y5 336 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 TVP23AA6NH52 213 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 CENPBD1B2RD01 187 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 E9PI62 339 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 TNFSF11O14788 317 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 OGG1O15527 345 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 PLPP2O43688 288 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 VAMP5O95183 116 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 CD8BP10966 210 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 FGF9P31371 208 aaPredicted RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 ENTPD1P49961 510 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 BMXP51813 675 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 TP53I3Q53FA7 332 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 PDLIM3Q53GG5 364 aaPredicted RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 ADAM5Q6NVV9 412 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 OR6X1Q8NH79 312 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 OR10D3Q8NH80 312 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 SNX33Q8WV41 574 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 SLIRPQ9GZT3 109 aaKnown RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 TXNL4BQ9NX01 149 aaKnown RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 ZNF175Q9Y473 711 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 SIRT4Q9Y6E7 314 aaPredicted RBP11.6□□□□□ -0.55
SGCA-201ENST00000262018 TMEM14AQ9Y6G1 99 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 PMF1-BGLAPU3KQ54 211 aa11.6□□□□□ -0.55
SGCA-201ENST00000262018 TENM1Q9UKZ4 2725 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 A0A075B6Q4 140 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 ISPDA4D126 451 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 PHYHO14832 338 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 CXCL13O43927 109 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 RAMP1O60894 148 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 KHDRBS3O75525 346 aaKnown RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 HLA-DPB1P04440 258 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 CD1AP06126 327 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 FCGR2AP12318 317 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 ZNF43P17038 809 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 ALOX5APP20292 161 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 GBX2P52951 348 aaPredicted RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 CARD18P57730 90 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 RAC3P60763 192 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 FABP5Q01469 135 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 TRAM1Q15629 374 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 FAM120AOSQ5T036 256 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 DMKNQ6E0U4 476 aaPredicted RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 PLEKHG7Q6ZR37 379 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 KCTD20Q7Z5Y7 419 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 NOXO1Q8NFA2 376 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 OR6Q1Q8NGQ2 317 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 OR6N2Q8NGY6 317 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 SGMS2Q8NHU3 365 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 HAVCR2Q8TDQ0 301 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 NEUROG1Q92886 237 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 TMEM203Q969S6 136 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 CPNE4Q96A23 557 aaPredicted RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 PELI1Q96FA3 418 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 SLC25A44Q96H78 314 aaPredicted RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 C1orf159Q96HA4 380 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 ADAD1Q96M93 576 aaKnown RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 RERGLQ9H628 205 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 AKIP1Q9NQ31 210 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 MRPL22Q9NWU5 206 aaKnown RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 MCTS1Q9ULC4 181 aaKnown RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 COA3Q9Y2R0 106 aaPredicted RBP11.59□□□□□ -0.55
SGCA-201ENST00000262018 KLHDC2Q9Y2U9 406 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 RNF115Q9Y4L5 304 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 ALPK2Q86TB3 2170 aa11.59□□□□□ -0.55
SGCA-201ENST00000262018 PRR14LQ5THK1 2151 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 SLC35F4A4IF30 521 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 METTL15A6NJ78 407 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 PRR32B1ATL7 298 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 SYNGR4O95473 234 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 GPANK1O95872 356 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 IGHG1P01857 330 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 PGA4P0DJD7 388 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 PGA3P0DJD8 388 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 IGHV4-31P0DP07 118 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 CFL1P23528 166 aaKnown RBP11.58□□□□□ -0.56
SGCA-201ENST00000262018 TGM4P49221 684 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 GLO1Q04760 184 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 CCDC58Q4VC31 144 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 THEM4Q5T1C6 240 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 RPL22L1Q6P5R6 122 aaKnown RBP11.58□□□□□ -0.56
SGCA-201ENST00000262018 CLEC2AQ6UVW9 174 aa11.58□□□□□ -0.56
SGCA-201ENST00000262018 GPAT4Q86UL3 456 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms