RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ACKR4Q9NPB9 350 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 SLCO1C1Q9NYB5 712 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 TCRBV5S2A0A599 114 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 MLF1P58340 268 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 SSX8Q7RTT4 187 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 FN3KRPQ9HA64 309 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 NOX3Q9HBY0 568 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 CLEC2DQ9UHP7 191 aa12.53□□□□□ -0.4
CDH1-201ENST00000261769 F5H5P2 479 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 SULT1B1O43704 296 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 IGFBP1P08833 259 aaPredicted RBP12.52□□□□□ -0.4
CDH1-201ENST00000261769 CEACAM1P13688 526 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 SLC25A1P53007 311 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 SYT6Q5T7P8 510 aaPredicted RBP12.52□□□□□ -0.4
CDH1-201ENST00000261769 LCN10Q6JVE6 187 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 FAHD1Q6P587 224 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 FAM185AQ8N0U4 392 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 OR4A16Q8NH70 328 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 ZNF285Q96NJ3 590 aa12.52□□□□□ -0.4
CDH1-201ENST00000261769 CGGBP1Q9UFW8 167 aaPredicted RBP12.52□□□□□ -0.4
CDH1-201ENST00000261769 FOCADQ5VW36 1801 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 LNP1A1A4G5 178 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 IFNA4P05014 189 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 PTAFRP25105 342 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 TAS2R4Q9NYW5 299 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 LOC285556D6RIA3 1793 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 HS3ST1O14792 307 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 UPK1BO75841 260 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 EIF4EP06730 217 aaKnown RBP12.52□□□□□ -0.41
CDH1-201ENST00000261769 DLX5P56178 289 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 GPR157Q5UAW9 335 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 HAGHLQ6PII5 290 aaPredicted RBP12.52□□□□□ -0.41
CDH1-201ENST00000261769 GTPBP8Q8N3Z3 284 aaPredicted RBP12.52□□□□□ -0.41
CDH1-201ENST00000261769 PP6455Q8WZ26 134 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 HAS2Q92819 552 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 S100PBPQ96BU1 408 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 TMEM74BQ9NUR3 256 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 IL20Q9NYY1 176 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
CDH1-201ENST00000261769 NCR1O76036 304 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 NFYAP23511 347 aaPredicted RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 MAGEA5P43359 124 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 CAV3P56539 151 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 DOC2BQ14184 412 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 UBE3DQ7Z6J8 389 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 COMTD1Q86VU5 262 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 PRSS35Q8N3Z0 413 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 OR4D6Q8NGJ1 314 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 PTPMT1Q8WUK0 201 aaPredicted RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 UBE2FQ969M7 185 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 ISYNA1Q9NPH2 558 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 AMDHD2Q9Y303 409 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 MEIKINA0A087WXM9 373 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 M0R036 132 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 TUSC2O75896 110 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 ZNF121P58317 390 aaPredicted RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 KRTCAP3Q53RY4 240 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 SLC36A1Q7Z2H8 476 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 OR13G1Q8NGZ3 307 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 OR10J5Q8NHC4 309 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 SIGLEC7Q9Y286 467 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 SVILO95425 2214 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 ZC3H12DA2A288 527 aaKnown RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 NPIPB8E9PQR5 432 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 CTDSP2O14595 271 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 RBMS2Q15434 407 aaKnown RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 OR2M7Q8NG81 312 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 OR2T35Q8NGX2 323 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 RIMS4Q9H426 269 aaPredicted RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 SIRT3Q9NTG7 399 aaPredicted RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 CALCBP10092 127 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 PEBP1P30086 187 aaKnown RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 ID4P47928 161 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 PSG6Q00889 435 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 LSAMPQ13449 338 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 C9orf152Q5JTZ5 239 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 APOOLQ6UXV4 268 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 SFTPA2Q8IWL1 248 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 RPL3LQ92901 407 aaKnown RBP12.51□□□□□ -0.41
CDH1-201ENST00000261769 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 PLEKHF2Q9H8W4 249 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 CACNA1EQ15878 2313 aa12.51□□□□□ -0.41
CDH1-201ENST00000261769 DNPH1O43598 174 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 MED6O75586 246 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 C1QAP02745 245 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 RPS27P42677 84 aaKnown RBP12.5□□□□□ -0.41
CDH1-201ENST00000261769 MFGE8Q08431 387 aaPredicted RBP12.5□□□□□ -0.41
CDH1-201ENST00000261769 CBLN3Q6UW01 205 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 DCUN1D4Q92564 292 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 S1PR3Q99500 378 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 NRTNQ99748 197 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
CDH1-201ENST00000261769 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
CDH1-201ENST00000261769 GIFP27352 417 aa12.5□□□□□ -0.41
CDH1-201ENST00000261769 CAMLGP49069 296 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms