RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 B4GALT7Q9UBV7 327 aa3.17□□□□□ -1.9
CCDC54-201ENST00000261058 MRM2Q9UI43 246 aaKnown RBP3.17□□□□□ -1.9
CCDC54-201ENST00000261058 BTNL2Q9UIR0 455 aa3.17□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF221Q9UK13 617 aa3.17□□□□□ -1.9
CCDC54-201ENST00000261058 PRELID3BQ9Y3B1 194 aa3.17□□□□□ -1.9
CCDC54-201ENST00000261058 CDH10Q9Y6N8 788 aa3.17□□□□□ -1.9
CCDC54-201ENST00000261058 USH1CQ9Y6N9 552 aa3.17□□□□□ -1.9
CCDC54-201ENST00000261058 URGCP-MRPS24S4R325 110 aa3.17□□□□□ -1.9
CCDC54-201ENST00000261058 CEP162Q5TB80 1403 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 ADGRL3Q9HAR2 1447 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 RRBP1Q9P2E9 1410 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 A0A1B0GW15 77 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 PP2D1A8MPX8 630 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 CENPXA8MT69 81 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 KLLNB2CW77 178 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 TCAPO15273 167 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 AIREO43918 545 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 GATBO75879 557 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 LRATO95237 230 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 FARS2O95363 451 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 BRI3O95415 125 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 LDOC1O95751 146 aaPredicted RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 LY6G6DO95868 133 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 HLA-HP01893 362 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 GP1BAP07359 652 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 CT62P0C5K7 136 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 HSPD1P10809 573 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 SLC2A1P11166 492 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 NR2C1P13056 603 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 KLK2P20151 261 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 UGT1A3P35503 534 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 TNFSF9P41273 254 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 MAGEA5P43359 124 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 YAP1P46937 504 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 RPL29P47914 159 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 HSPA2P54652 639 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 RAB40BQ12829 278 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 EIF4EBP2Q13542 120 aaPredicted RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 NDUFA9Q16795 377 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 FHL5Q5TD97 284 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 ACSM5Q6NUN0 579 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 UQCC3Q6UW78 93 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 ENPP6Q6UWR7 440 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 B3GNT7Q8NFL0 401 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 OR5B17Q8NGF7 314 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 OR6X1Q8NH79 312 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 OR2V1Q8NHB1 315 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 CNIH3Q8TBE1 160 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 LGALS14Q8TCE9 139 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 UBE2E3Q969T4 207 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 CELF6Q96J87 481 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 CNN2Q99439 309 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 MCHR1Q99705 422 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 SLC6A7Q99884 636 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF2Q9BSG1 426 aaPredicted RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 SYT4Q9H2B2 425 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 ASB7Q9H672 318 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 KIR3DX1Q9H7L2 352 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 WDR54Q9H977 334 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 SLC17A5Q9NRA2 495 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 IL36GQ9NZH8 169 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 CCDC59Q9P031 241 aaKnown RBP3.16□□□□□ -1.9
CCDC54-201ENST00000261058 WIF1Q9Y5W5 379 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 NUBP2Q9Y5Y2 271 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 FRMPD3Q5JV73 1810 aa3.16□□□□□ -1.9
CCDC54-201ENST00000261058 NUP160Q12769 1436 aa3.15□□□□□ -1.9
CCDC54-201ENST00000261058 A0A1W2PRF3 423 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 A0A1W2PRM7 423 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 SLC5A10A0PJK1 596 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 METTL15A6NJ78 407 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF705EA8MWA4 302 aaPredicted RBP3.15□□□□□ -1.91
CCDC54-201ENST00000261058 SIVA1O15304 175 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 XRCC2O43543 280 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 CHP2O43745 196 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 HSBP1O75506 76 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 MED6O75586 246 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 FCN3O75636 299 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 DIRAS1O95057 198 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 SEMG1P04279 462 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 RBP1P09455 135 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 ADRB3P13945 408 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 IGLL1P15814 213 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 RAB3AP20336 220 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 PMCHP20382 165 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 ME2P23368 584 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 MPIP34949 423 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 EIF2B2P49770 351 aaKnown RBP3.15□□□□□ -1.91
CCDC54-201ENST00000261058 RAB13P51153 203 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 CCR8P51685 355 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 PSPHP78330 225 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 PITPNAQ00169 270 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF45Q02386 682 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 SLC39A6Q13433 755 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 IMPG1Q17R60 797 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 BSXQ3C1V8 233 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 FRMPD2BQ6IN97 320 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 REEP3Q6NUK4 255 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 DHFR2Q86XF0 187 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 MREGQ8N565 214 aa3.15□□□□□ -1.91
CCDC54-201ENST00000261058 CATSPER1Q8NEC5 780 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms