RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 A0A0B4J2E0 115 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 A0A1B0GX12 115 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 DUSP1P28562 367 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 ZNF793Q6ZN11 406 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 MDFIC2A0A1B0GVS7 189 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 UBE2KP61086 200 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 FAM109AQ8N4B1 249 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 OIT3Q8WWZ8 545 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 SHARPINQ9H0F6 387 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 A0A096LPE4 126 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 A0A1W2PPZ6 126 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 PPM1DO15297 605 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 GIPP09681 153 aaPredicted RBP17.15■□□□□ 0.34
PTPRE-201ENST00000254667 ABCD3P28288 659 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 CLINT1Q14677 625 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 GUSBP11Q6P575 273 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 STAC2Q6ZMT1 411 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 OR2G2Q8NGZ5 317 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 SLC35B4Q969S0 331 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 OR2A5Q96R48 311 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 C1QTNF6Q9BXI9 259 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 VN1R1Q9GZP7 353 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 PRKNO60260 465 aaPredicted RBP17.15■□□□□ 0.34
PTPRE-201ENST00000254667 MT-CO3P00414 261 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 GLRA1P23415 457 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 EPHA8P29322 1005 aaPredicted RBP17.15■□□□□ 0.34
PTPRE-201ENST00000254667 SRP9P49458 86 aaKnown RBP17.15■□□□□ 0.34
PTPRE-201ENST00000254667 KIAA0040Q15053 153 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 CREB3L2Q70SY1 520 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 C5orf67F2Z3F1 127 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 TOX3O15405 576 aaPredicted RBP17.15■□□□□ 0.34
PTPRE-201ENST00000254667 ALOX5APP20292 161 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 FABP5Q01469 135 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 AQP6Q13520 282 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 OR1L3Q8NH93 324 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 LILRB4Q8NHJ6 448 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 DRD3P35462 400 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 HES1Q14469 280 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 LINC01555Q8NAE3 123 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 DYNC2LI1Q8TCX1 351 aa17.15■□□□□ 0.34
PTPRE-201ENST00000254667 CRYZL1O95825 349 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 NKX2-1P43699 371 aaPredicted RBP17.14■□□□□ 0.33
PTPRE-201ENST00000254667 SSBP1Q04837 148 aaKnown RBP17.14■□□□□ 0.33
PTPRE-201ENST00000254667 DUSP2Q05923 314 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 IL20Q9NYY1 176 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 CTSVO60911 334 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 NME2P22392 152 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 MCCD1P59942 119 aaPredicted RBP17.14■□□□□ 0.33
PTPRE-201ENST00000254667 C12orf73Q69YU5 71 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 SMIM15Q7Z3B0 74 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 YIPF6Q96EC8 236 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 UFSP2Q9NUQ7 469 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 TRAV1-2A0A0B4J238 106 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 MYF5P13349 255 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 FOLR1P15328 257 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 ADRA2CP18825 462 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 SLC25A1P53007 311 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 OR1C1Q15619 314 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 ANKRD34AQ69YU3 496 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 ZNF2Q9BSG1 426 aaPredicted RBP17.14■□□□□ 0.33
PTPRE-201ENST00000254667 MFRPQ9BY79 579 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 SLCO1C1Q9NYB5 712 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 ZNF225Q9UK10 706 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 ZNF816-ZNF321PA0A0X1KG74 233 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 M0R1B8 84 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 BHLHE40O14503 412 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 COL9A1P20849 921 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 PCSK6P29122 969 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 TGM4P49221 684 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 PPT1P50897 306 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 PCBP4P57723 403 aaKnown RBP17.14■□□□□ 0.33
PTPRE-201ENST00000254667 ZNF85Q03923 595 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.14■□□□□ 0.33
PTPRE-201ENST00000254667 C2orf76Q3KRA6 126 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 GCNT2Q8N0V5 402 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 ZNF321PQ8N8H1 164 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 OR13C8Q8NGS7 320 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 RNF167Q9H6Y7 350 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 KCNE3Q9Y6H6 103 aa17.14■□□□□ 0.33
PTPRE-201ENST00000254667 IGHV3-15A0A0B4J1V0 119 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 POM121CA8CG34 1229 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 OR4D9Q8NGE8 314 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 SLC7A6Q92536 515 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 RAC1P63000 192 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 SLC22A13Q9Y226 551 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 B4GALT1P15291 398 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 GSK3AP49840 483 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 WNT3P56703 355 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 DGCR2P98153 550 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 SLC30A7Q8NEW0 376 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 PXT1Q8NFP0 134 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 OR51H1Q8NH63 302 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 IGHV5-51A0A0C4DH38 117 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 DEFA4P12838 97 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 THBS4P35443 961 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 EVX1P49640 407 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 PRAMEF5Q5TYX0 476 aa17.13■□□□□ 0.33
PTPRE-201ENST00000254667 PRAMEF6Q5VXH4 476 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms