RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZNF629Q9UEG4 869 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 OR52A1Q9UKL2 312 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 HIF3AQ9Y2N7 669 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 TXNL1O43396 289 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 BCL2L11O43521 198 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 MED6O75586 246 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 CRTAPO75718 401 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 SNRNP70P08621 437 aaKnown RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 RPA2P15927 270 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 JMJD6Q6NYC1 403 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ADGRE4PQ86SQ3 457 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 ATG4DQ86TL0 474 aaPredicted RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 NAXDQ8IW45 347 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 OR13C8Q8NGS7 320 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 FLVCR1-AS1Q8TAF5 88 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 CNTNAP3BQ96NU0 1288 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 NMNAT2Q9BZQ4 307 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 SLC25A32Q9H2D1 315 aa10.74□□□□□ -0.69
USHBP1-201ENST00000252597 LSM5Q9Y4Y9 91 aaKnown RBP10.74□□□□□ -0.69
USHBP1-201ENST00000252597 CEP250Q9BV73 2442 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 PRSS37A4D1T9 235 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 ACTL6AO96019 429 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 RAB6AP20340 208 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 HSD11B1P28845 292 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 CDAP32320 146 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 CLDN6P56747 220 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 PRTGQ2VWP7 1150 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 FAM76BQ5HYJ3 339 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 GPX8Q8TED1 209 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 ISOC2Q96AB3 205 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 LCORQ96JN0 433 aaPredicted RBP10.73□□□□□ -0.69
USHBP1-201ENST00000252597 SOX7Q9BT81 388 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 TMPRSS13Q9BYE2 586 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 RPS10P5Q9NQ39 176 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 PRODH2Q9UF12 536 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 GMEB2Q9UKD1 530 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF749O43361 778 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 SEMA4FO95754 770 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 GP1BAP07359 652 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 SPP1P10451 314 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 CD1CP29017 333 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 INSM1Q01101 510 aaPredicted RBP10.73□□□□□ -0.69
USHBP1-201ENST00000252597 IL10RAQ13651 578 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 FAM122BQ7Z309 247 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 OR51F2Q8NH61 342 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 OR51E1Q8TCB6 317 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 ARL11Q969Q4 196 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 SLC25A21Q9BQT8 299 aaPredicted RBP10.73□□□□□ -0.69
USHBP1-201ENST00000252597 PRELID3BQ9Y3B1 194 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 RHBDD3Q9Y3P4 386 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 RNF215Q9Y6U7 377 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 TMED7-TICAM2A0A0A6YYA0 188 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 TMEM218A2RU14 115 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 BET1O15155 118 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 TNFSF12O43508 249 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 FOXS1O43638 330 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 ABHD16AO95870 558 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 RCC1P18754 421 aaPredicted RBP10.73□□□□□ -0.69
USHBP1-201ENST00000252597 EEF1A1P5Q5VTE0 462 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 TMEM92Q6UXU6 159 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 NUP54Q7Z3B4 507 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 OR10Z1Q8NGY1 313 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 CD300LFQ8TDQ1 290 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 ARL5BQ96KC2 179 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 MRI1Q9BV20 369 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 NUDT9Q9BW91 350 aa10.73□□□□□ -0.69
USHBP1-201ENST00000252597 A0A0A6YYH2 397 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 TRBV5-5A0A0J9YX44 114 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 A0A1W2PQF6 199 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 A6NJ64 397 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 SGCEO43556 437 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 PRH1P02810 166 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 AMY2BP19961 511 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 SFTPDP35247 375 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 KIR2DL1P43626 348 aaPredicted RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 GPR3P46089 330 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 ASCL1P50553 236 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 SNRPEP62304 92 aaKnown RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 SMCO1Q147U7 214 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 SEMA6DQ8NFY4 1073 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 TOMM40LQ969M1 308 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 MRPL22Q9NWU5 206 aaKnown RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 ATPIF1Q9UII2 106 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF175Q9Y473 711 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 C9orf170A2RU37 121 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 RNF222A6NCQ9 220 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 MSGN1A6NI15 193 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 AQP8O94778 261 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 S100A9P06702 114 aaKnown RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 TPT1P13693 172 aaKnown RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 IGFBP4P22692 258 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 FCARP24071 287 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 PSMB6P28072 239 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 RORAP35398 523 aa10.72□□□□□ -0.69
USHBP1-201ENST00000252597 RPL27P61353 136 aaKnown RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 ELAVL1Q15717 326 aaKnown RBP10.72□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF141Q15928 474 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms