RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 C11orf88Q6PI97 169 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 NAXDQ8IW45 347 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 C11orf40Q8WZ69 217 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 EDEM2Q9BV94 578 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 ARL6Q9H0F7 186 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 MYEF2Q9P2K5 600 aaKnown RBP19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 B3GALT5Q9Y2C3 310 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 A0A1W2PNV4 684 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 TMEM200CA6NKL6 621 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 ZNF736B4DX44 427 aaPredicted RBP19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 BCAT2O15382 392 aaPredicted RBP19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 POU3F2P20265 443 aaPredicted RBP19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 GPR85P60893 370 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 ZNF813Q6ZN06 617 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 C12orf45Q8N5I9 185 aaPredicted RBP19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 SCARB1Q8WTV0 552 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 RAB22AQ9UL26 194 aa19.28■□□□□ 0.68
SH2D3A-201ENST00000245908 EIF1AYO14602 144 aaKnown RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 HOXB1P14653 301 aaPredicted RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 HSD11B1P28845 292 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 BDKRB2P30411 391 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 BIDP55957 195 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 ZNF169Q14929 603 aaPredicted RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 NR0B2Q15466 257 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 HYAL4Q2M3T9 481 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 ATPAF1Q5TC12 328 aaPredicted RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 RAB12Q6IQ22 244 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 HSD17B13Q7Z5P4 300 aaPredicted RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 SLC38A9Q8NBW4 561 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 OR10H5Q8NGA6 315 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 AQP3Q92482 292 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 FGGYQ96C11 551 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 SLAMF6Q96DU3 332 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 ZMAT3Q9HA38 289 aaKnown RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 SERINC1Q9NRX5 453 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 TMEM235A6NFC5 223 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 TOX3O15405 576 aaPredicted RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 TTRP02766 147 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 FLI1Q01543 452 aaPredicted RBP19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 NKAIN1Q4KMZ8 207 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 SLC25A53Q5H9E4 307 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 PHF19Q5T6S3 580 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 BPIFB2Q8N4F0 458 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 BVESQ8NE79 360 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 CNTD2Q9H8S5 307 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 PISDQ9UG56 409 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 CYB5R1Q9UHQ9 305 aa19.27■□□□□ 0.68
SH2D3A-201ENST00000245908 TRBV11-1A0A0K0K1C0 115 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 SHISA8B8ZZ34 492 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 H3BML4 177 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 EFNA2O43921 213 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 RPA2P15927 270 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 ZNF260Q3ZCT1 412 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 LY6G6FQ5SQ64 297 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 PAPD4Q6PIY7 484 aaKnown RBP19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 GSG1LQ6UXU4 331 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 TMPRSS9Q7Z410 1059 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 TMED4Q7Z7H5 227 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 TDHQ8IZJ6 230 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 EIF4E3Q8N5X7 224 aaKnown RBP19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 ACBD4Q8NC06 268 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 B3GAT1Q9P2W7 334 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 METTL21EPA6NDL7 271 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 WIPF3A6NGB9 483 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 RFPL4AA6NLU0 287 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 RFPL4AL1F8VTS6 287 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 ZNF28P17035 718 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 SORDQ00796 357 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 TMEM71Q6P5X7 295 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 KLHL24Q6TFL4 600 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 ZNF584Q8IVC4 421 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 OR13C8Q8NGS7 320 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 MRGPRX4Q96LA9 322 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 WDR77Q9BQA1 342 aaPredicted RBP19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 EMC6Q9BV81 110 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 MRPL13Q9BYD1 178 aaKnown RBP19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 KLRF1Q9NZS2 232 aa19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 RPH3AQ9Y2J0 694 aaPredicted RBP19.26■□□□□ 0.67
SH2D3A-201ENST00000245908 RAB27BO00194 218 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 MSX1P28360 303 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 GK2Q14410 553 aaPredicted RBP19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 MEF2DQ14814 521 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 ALKAL2Q6UX46 152 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 ZNF574Q6ZN55 896 aaPredicted RBP19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 OR10S1Q8NGN2 331 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 SLC6A7Q99884 636 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 PBOV1Q9GZY1 135 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 SLC2A8Q9NY64 477 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 PPP4R1LQ9P1A2 415 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 CPED1A4D0V7 1026 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 ABCD4O14678 606 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 ZNF41P51814 821 aaPredicted RBP19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 ACY1Q03154 408 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 PLPPR5Q32ZL2 321 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 PAQR4Q8N4S7 273 aaPredicted RBP19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 CLRN3Q8NCR9 226 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 OR1M1Q8NGA1 313 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 OR1J2Q8NGS2 313 aa19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 ATXN7L1Q9ULK2 861 aaPredicted RBP19.25■□□□□ 0.67
SH2D3A-201ENST00000245908 LAMA1P25391 3075 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms