RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PAPD4Q6PIY7 484 aaKnown RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 C17orf107Q6ZR85 190 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 TMPRSS9Q7Z410 1059 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 NAXDQ8IW45 347 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 NFAM1Q8NET5 270 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 OR13C8Q8NGS7 320 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 PTX4Q96A99 478 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 SLC6A7Q99884 636 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 SHARPINQ9H0F6 387 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 FAM206AQ9NX38 181 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF230Q9UIE0 474 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 ATXN7L1Q9ULK2 861 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 ASCC3Q8N3C0 2202 aaKnown RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 TRAV14DV4A0A0A6YYC5 116 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 SMAD9O15198 467 aaKnown RBP12.81□□□□□ -0.36
HIF3A-202ENST00000244303 MMP16P51512 607 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 BIDP55957 195 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 ZMYND11Q15326 602 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF813Q6ZN06 617 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF584Q8IVC4 421 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 SLC38A9Q8NBW4 561 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 STEAP2Q8NFT2 490 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 C11orf40Q8WZ69 217 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 SLAMF6Q96DU3 332 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 TGIF2Q9GZN2 237 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 MFFQ9GZY8 342 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 NPIPB13A6NJU9 1138 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 RFPL4AA6NLU0 287 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 VSTM2BA6NLU5 285 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 NPIPB4C9JG80 1138 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 RFPL4AL1F8VTS6 287 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 TOR1AO14656 332 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 TTRP02766 147 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 HEXBP07686 556 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 RPA2P15927 270 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 RAB6AP20340 208 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 BDKRB2P30411 391 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 CALCRP30988 508 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 GNALP38405 381 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 DHRS2Q13268 280 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 NKPD1Q17RQ9 610 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 RHBDD2Q6NTF9 364 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 TMEM71Q6P5X7 295 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF574Q6ZN55 896 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-202ENST00000244303 CD163Q86VB7 1156 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 PAQR4Q8N4S7 273 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-202ENST00000244303 OR10H5Q8NGA6 315 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 OR52N4Q8NGI2 321 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 ASB13Q8WXK3 278 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 AQP3Q92482 292 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 FOXRED1Q96CU9 486 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-202ENST00000244303 CMBLQ96DG6 245 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 EDEM2Q9BV94 578 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 GLS2Q9UI32 602 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 FBXL2Q9UKC9 423 aa12.81□□□□□ -0.36
HIF3A-202ENST00000244303 METTL21EPA6NDL7 271 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 LIPT2A6NK58 231 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 RAB27BO00194 218 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF208O43345 1280 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 EFNA2O43921 213 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 SPDEFO95238 335 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 LIPCP11150 499 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 FOSL2P15408 326 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 SUMO3P55854 103 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-202ENST00000244303 UNC119Q13432 240 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF260Q3ZCT1 412 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF660Q6AZW8 331 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-202ENST00000244303 OVCH2Q7RTZ1 564 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 FJX1Q86VR8 437 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 FAM46BQ96A09 425 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 ADAT3Q96EY9 351 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-202ENST00000244303 CDX2Q99626 313 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-202ENST00000244303 PTGES2Q9H7Z7 377 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 SERINC1Q9NRX5 453 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 MED9Q9NWA0 146 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 KLRF1Q9NZS2 232 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF107Q9UII5 783 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-202ENST00000244303 RAB22AQ9UL26 194 aa12.8□□□□□ -0.36
HIF3A-202ENST00000244303 TRBV11-1A0A0K0K1C0 115 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 CPED1A4D0V7 1026 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 TMEM200CA6NKL6 621 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 MPGP29372 298 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 DHPSP49366 369 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-202ENST00000244303 KLHL24Q6TFL4 600 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 TRAPPC6BQ86SZ2 158 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 PDZD9Q8IXQ8 264 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 GVQW1Q8N7I0 195 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 OR10S1Q8NGN2 331 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 NUBPLQ8TB37 319 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 EDAQ92838 391 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 DMRTA2Q96SC8 542 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 PBOV1Q9GZY1 135 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 MYOZ1Q9NP98 299 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-202ENST00000244303 ALKBH4Q9NXW9 302 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 B3GAT1Q9P2W7 334 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 CYB5R1Q9UHQ9 305 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 SRPK3Q9UPE1 567 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 VSIG4Q9Y279 399 aa12.79□□□□□ -0.36
HIF3A-202ENST00000244303 WDR87Q6ZQQ6 2873 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms