RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 LRRC75AQ8NAA5 344 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 OR1J1Q8NGS3 322 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 ZNF570Q96NI8 536 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 TXNIPQ9H3M7 391 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 SLC25A19Q9HC21 320 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 NRIP3Q9NQ35 241 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 DCAF16Q9NXF7 216 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 GRHPRQ9UBQ7 328 aa11.67□□□□□ -0.54
DDX39A-201ENST00000242776 IGLV3-9A0A075B6K5 115 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 A6NIZ1 184 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 XKRYO14609 159 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 IMPA2O14732 288 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 IDH3BO43837 385 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 PPP1R3DO95685 299 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 SNAP29O95721 258 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 HMGN1P05114 100 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 SBK2P0C263 348 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 ZNF250P15622 560 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 SDHAP31040 664 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 GRK5P34947 590 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 RAP1BP61224 184 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 RPL27P61353 136 aaKnown RBP11.66□□□□□ -0.54
DDX39A-201ENST00000242776 RAP1AP62834 184 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 MELKQ14680 651 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 PTGES3Q15185 160 aaKnown RBP11.66□□□□□ -0.54
DDX39A-201ENST00000242776 TBC1D28Q2M2D7 210 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 SPATC1Q76KD6 591 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 ZNF627Q7L945 461 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 DHRSXQ8N5I4 330 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 OR8D4Q8NGM9 314 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 ZNF519Q8TB69 540 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 SLC25A28Q96A46 364 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 ELMOD3Q96FG2 381 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 ERMAPQ96PL5 475 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-201ENST00000242776 MS4A7Q9GZW8 240 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-201ENST00000242776 IL20RAQ9UHF4 553 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 FBXL3Q9UKT7 428 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 IER3IP1Q9Y5U9 82 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 AUP1Q9Y679 476 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 NOTCH1P46531 2555 aa11.66□□□□□ -0.54
DDX39A-201ENST00000242776 MDFIC2A0A1B0GVS7 189 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 ZAR1LA6NP61 321 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 TRAPPC2LH3BP13 241 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 BHLHE40O14503 412 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 ARPC3O15145 178 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 IFNGP01579 166 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 MT-ND5P03915 603 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 NR2C1P13056 603 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 MPV17P39210 176 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 AQP4P55087 323 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 UCP2P55851 309 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 CDC42P60953 191 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 SEC61A1P61619 476 aaKnown RBP11.65□□□□□ -0.54
DDX39A-201ENST00000242776 ERVK-25P63136 954 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 CDK5Q00535 292 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 GINS1Q14691 196 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 SLC9A3R2Q15599 337 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 TTC23Q5W5X9 447 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 TMEM53Q6P2H8 277 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 ADCK1Q86TW2 530 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 LNX2Q8N448 690 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 LRRC18Q8N456 261 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 CYGBQ8WWM9 190 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 ASB10Q8WXI3 467 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 PLEKHA8Q96JA3 519 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 MBOAT4Q96T53 435 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 NKIRAS2Q9NYR9 191 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 PLEK2Q9NYT0 353 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 KLHL21Q9UJP4 597 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 PURGQ9UJV8 347 aaKnown RBP11.65□□□□□ -0.54
DDX39A-201ENST00000242776 ADAM18Q9Y3Q7 739 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 WNK1Q9H4A3 2382 aa11.65□□□□□ -0.54
DDX39A-201ENST00000242776 TEX13CA0A0J9YWL9 993 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 LOC100130705A0A1B0GUX0 176 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 POM121CA8CG34 1229 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 FOXH1O75593 365 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 TXNDC12O95881 172 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 IGHG1P01857 330 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 RNASE1P07998 156 aaKnown RBP11.64□□□□□ -0.55
DDX39A-201ENST00000242776 KRR1Q13601 381 aaKnown RBP11.64□□□□□ -0.55
DDX39A-201ENST00000242776 TMEM255AQ5JRV8 349 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 THEM4Q5T1C6 240 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 SLX4IPQ5VYV7 408 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 NHLRC1Q6VVB1 395 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 SLC16A14Q7RTX9 510 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 FAM122BQ7Z309 247 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 C1QL4Q86Z23 238 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 IQCF1Q8N6M8 205 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 OR4Q3Q8NH05 313 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 TMEM54Q969K7 222 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 TMIGD2Q96BF3 282 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 HRASLS5Q96KN8 279 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 ADI1Q9BV57 179 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 TMEM38BQ9NVV0 291 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 FAM118AQ9NWS6 357 aa11.64□□□□□ -0.55
DDX39A-201ENST00000242776 GLTPQ9NZD2 209 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms