RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ERVFRD-1P60508 538 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 EFNB1P98172 346 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 DPY19L2P2Q6ZN68 376 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF836Q6ZNA1 936 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 MOB1BQ7L9L4 216 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 SLC22A24Q8N4F4 322 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 SH3RF2Q8TEC5 729 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 SHDQ96IW2 340 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 MAP1LC3BQ9GZQ8 125 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 GDE1Q9NZC3 331 aa11.71□□□□□ -0.54
VAMP4-201ENST00000236192 A8MVM7 634 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 Q5PR19 223 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 NUDT10Q8NFP7 164 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 KCNG3Q8TAE7 436 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 CACFD1Q9UGQ2 172 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 TGIF2-C20orf24A0A0A6YYL0 155 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF728P0DKX0 622 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM33P57088 247 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 OGFOD3Q6PK18 319 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 DTWD2Q8NBA8 298 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 OR5L1Q8NGL2 311 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 PFN4Q8NHR9 129 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
VAMP4-201ENST00000236192 NRXN3Q9Y4C0 1643 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 CYB5R3P00387 301 aaPredicted RBP11.7□□□□□ -0.54
VAMP4-201ENST00000236192 KITLGP21583 273 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 BMP5P22003 454 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 FCARP24071 287 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 DIO1P49895 249 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 PPP1CBP62140 327 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 IL10RAQ13651 578 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM184AQ6ZMB5 413 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 SLCO4C1Q6ZQN7 724 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 TBL1XR1Q9BZK7 514 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 CHST6Q9GZX3 395 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 CGGBP1Q9UFW8 167 aaPredicted RBP11.7□□□□□ -0.54
VAMP4-201ENST00000236192 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 S100A7P31151 101 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 BMI1P35226 326 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 SLC6A12P48065 614 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 BIDP55957 195 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF90Q03938 601 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 TLE1Q04724 770 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 PNLIPRP3Q17RR3 467 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 PYY3Q5JQD4 70 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM59Q9BXS4 323 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM100Q9NV29 134 aa11.7□□□□□ -0.54
VAMP4-201ENST00000236192 NPIPA5A0A0B4J1W7 369 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 A0A1W2PNV4 684 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ALOX5APP20292 161 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 HBG1P69891 147 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 HBG2P69892 147 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 RCBTB1Q8NDN9 531 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 OR4S1Q8NGB4 309 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 KLHL13Q9P2N7 655 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 MEX3AA1L020 520 aaKnown RBP11.69□□□□□ -0.54
VAMP4-201ENST00000236192 CD74P04233 296 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 PGA4P0DJD7 388 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 NID1P14543 1247 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 GABRA4P48169 554 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 BPIFB3P59826 476 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 OR4A47Q6IF82 309 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 LCN15Q6UWW0 184 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 PAQR9Q6ZVX9 377 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 APCDD1Q8J025 514 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ADAMTS17Q8TE56 1095 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 LCN9Q8WX39 176 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 NUS1Q96E22 293 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ARSGQ96EG1 525 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 GALNT14Q96FL9 552 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 BCL2L10Q9HD36 194 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 CD8AP01732 235 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 SEC11BP0C7V7 166 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ERVS71-1P61550 626 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ARRDC1Q8N5I2 433 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 SCAMP4Q969E2 229 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 REEP6Q96HR9 211 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 IL17FQ96PD4 163 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ADAM29Q9UKF5 820 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 MYO10Q9HD67 2058 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 CCDC163A0A0D9SF12 145 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 SLC17A2O00624 439 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-201ENST00000236192 TLX3O43711 291 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-201ENST00000236192 IL12BP29460 328 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 ACAA2P42765 397 aaKnown RBP11.69□□□□□ -0.54
VAMP4-201ENST00000236192 CTSOP43234 321 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-201ENST00000236192 RGRP47804 291 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 SCD5Q86SK9 330 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 IP6K3Q96PC2 410 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms