RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 MAP3K3Q99759 626 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 AUNIPQ9H7T9 357 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 GPR173Q9NS66 373 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 SCN9AQ15858 1988 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 PTHLHP12272 177 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 TGFBR1P36897 503 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 CGGBP1Q9UFW8 167 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 M0R082 166 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 PCMT1P22061 227 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 DSC1Q08554 894 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 RUNX3Q13761 415 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 MED25Q71SY5 747 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ATRXP46100 2492 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 CKAP5Q14008 2032 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 SNRNP200O75643 2136 aaKnown RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 PTBP3O95758 552 aaKnown RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 ICAM2P13598 275 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 LCN15Q6UWW0 184 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 GOT1L1Q8NHS2 421 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 CSF3RQ99062 836 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ZNF814B7Z6K7 855 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 GSTZ1O43708 216 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 FPR2P25090 351 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ARL16Q0P5N6 197 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 PFN4Q8NHR9 129 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 NUDCD2Q8WVJ2 157 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 MBTPS2O43462 519 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 FZD6O60353 706 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 CST5P28325 142 aaPredicted RBP7.5□□□□□ -1.21
APOB-201ENST00000233242 ZNF528Q3MIS6 628 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 VRK3Q8IV63 474 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 OR5M1Q8NGP8 315 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 OBP2BQ9NPH6 170 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 A0A087WV62 115 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 GLAP06280 429 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 PGA3P0DJD8 388 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 FOLR3P41439 243 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 LYRM7Q5U5X0 104 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 MARVELD3Q96A59 401 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 Q96M85 177 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 CA14Q9ULX7 337 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 RICTORQ6R327 1708 aa7.5□□□□□ -1.21
APOB-201ENST00000233242 ZNF320A2RRD8 509 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 TCAPO15273 167 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 MRPL33O75394 65 aaKnown RBP7.49□□□□□ -1.21
APOB-201ENST00000233242 APOBEC1P41238 236 aaKnown RBP7.49□□□□□ -1.21
APOB-201ENST00000233242 DEFB110Q30KQ9 67 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 ZNF845Q96IR2 970 aaPredicted RBP7.49□□□□□ -1.21
APOB-201ENST00000233242 SLC17A2O00624 439 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 CTSAP10619 480 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 HIST1H1CP16403 213 aaKnown RBP7.49□□□□□ -1.21
APOB-201ENST00000233242 ZNF626Q68DY1 528 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 PRR22Q8IZ63 422 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 BCL7CQ8WUZ0 217 aaPredicted RBP7.49□□□□□ -1.21
APOB-201ENST00000233242 HDAC8Q9BY41 377 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 BARHL1Q9BZE3 327 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 EPHA2P29317 976 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 RPL7L1Q6DKI1 246 aaKnown RBP7.49□□□□□ -1.21
APOB-201ENST00000233242 NXPE3Q969Y0 559 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 TAAR9Q96RI9 348 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 SSUH2Q9Y2M2 353 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 PSMB5P28074 263 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 CSN1S1P47710 185 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 CASP6P55212 293 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 KRTDAPP60985 99 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 CDONQ4KMG0 1287 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 C9orf62Q8N4C0 152 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 TTC9BQ8N6N2 239 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 IL22RA1Q8N6P7 574 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 OR13C5Q8NGS8 318 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 THNSL2Q86YJ6 484 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 OR11L1Q8NGX0 322 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 OR5B3Q8NH48 314 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 ZNF596Q8TC21 504 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 ULBP3Q9BZM4 244 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 AHCTF1Q8WYP5 2266 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 DOPEY2Q9Y3R5 2298 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 CACNA1IQ9P0X4 2223 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 STAG3L2P0CL84 134 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 RBP2P50120 134 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 BPIFB3P59826 476 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 FAM209AQ5JX71 171 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 DGAT2L6Q6ZPD8 337 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 TRAPPC1Q9Y5R8 145 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 AKAP11Q9UKA4 1901 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 OR5H8P0DN80 308 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 MIDNQ504T8 468 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 Q6ZSR6 202 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 NUDT9Q9BW91 350 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 MTCH1Q9NZJ7 389 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 TJP1Q07157 1748 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 TMX2-CTNND1H3BSU7 103 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 PLPP1O14494 284 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 THEM4Q5T1C6 240 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 LHFPL2Q6ZUX7 228 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 RTN4IP1Q8WWV3 396 aaPredicted RBP7.49□□□□□ -1.21
APOB-201ENST00000233242 PRRX2Q99811 253 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 CLDND1Q9NY35 253 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 NTNG1Q9Y2I2 539 aa7.49□□□□□ -1.21
APOB-201ENST00000233242 CTNSO60931 367 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms