RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 CPN1P15169 458 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF250P15622 560 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF84P51523 738 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 ANKRD37Q7Z713 158 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 LIPHQ8WWY8 451 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 HPF1Q9NWY4 346 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 hCG_1807616A0A1W2PRN6 198 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 MCRIP1C9JLW8 97 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 DXOO77932 396 aaKnown RBP13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 SERPINA2P20848 420 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 MSX1P28360 303 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 ZP1P60852 638 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC9A3R2Q15599 337 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 CATSPERDQ86XM0 798 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 SPEM1Q8N4L4 309 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 PNPLA2Q96AD5 504 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 GPR84Q9NQS5 396 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 TRBV5-7A0A0A0MS05 114 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 RLN2P04090 185 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 TMEM225BP0DP42 221 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 VSIG10L2P0DP72 767 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 CSF2RBP32927 897 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 BTN1A1Q13410 526 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 AANATQ16613 207 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 GALNT16Q8N428 558 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 RELL2Q8NC24 303 aaPredicted RBP13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 SCARB1Q8WTV0 552 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 C1QTNF6Q9BXI9 259 aa13.38□□□□□ -0.27
UBE2D4-201ENST00000222402 IGLV1-36A0A0B4J1U3 117 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 ABOP16442 354 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 MAP2K6P52564 334 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC51BQ86UW2 128 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 OR52N4Q8NGI2 321 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 DCUN1D4Q92564 292 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 NUP50Q9UKX7 468 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 RHBDD3Q9Y3P4 386 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 CACNA1EQ15878 2313 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 SULT1C2O00338 296 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 HRH1P35367 487 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 AIMP2Q13155 320 aaKnown RBP13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 THEM4Q5T1C6 240 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 FNDC7Q5VTL7 733 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 RHBDD2Q6NTF9 364 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 ZCCHC4Q9H5U6 513 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 CLDN16Q9Y5I7 305 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 IGLV3-19P01714 112 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 ACSM4P0C7M7 580 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 LUMP51884 338 aaPredicted RBP13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 GVQW1Q8N7I0 195 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 TMEM229BQ8NBD8 167 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 PLPP5Q8NEB5 264 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC26A10Q8NG04 563 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 NEK7Q8TDX7 302 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 ASB10Q8WXI3 467 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF501Q96CX3 271 aaPredicted RBP13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 MRGPRX4Q96LA9 322 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 VRK1Q99986 396 aaPredicted RBP13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 NAA11Q9BSU3 229 aaPredicted RBP13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 CNTD2Q9H8S5 307 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC17A5Q9NRA2 495 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 OPN4Q9UHM6 478 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 SIT1Q9Y3P8 196 aa13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 MRPS18BQ9Y676 258 aaKnown RBP13.37□□□□□ -0.27
UBE2D4-201ENST00000222402 OR5H14A6NHG9 310 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 IGF2P01344 180 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 CCL7P80098 99 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 KCNG3Q8TAE7 436 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 SEH1LQ96EE3 360 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 SCGB1D2O95969 90 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 CX3CR1P49238 355 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 HLXQ14774 488 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 ANGPTL6Q8NI99 470 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 TTC9Q92623 222 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 NAT6Q93015 286 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 HLA-CQ95604 372 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 NARFLQ9H6Q4 476 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 ANKRD10Q9NXR5 420 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 MPC2O95563 127 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 OTX2P32243 289 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 RBMXP38159 391 aaKnown RBP13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 NPY4RP50391 375 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 OGFOD3Q6PK18 319 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 OPN5Q6U736 354 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 OR10K1Q8NGX5 313 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 MCHR2Q969V1 340 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 CDC6Q99741 560 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 ULBP2Q9BZM5 246 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 PCED1AQ9H1Q7 454 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 CHMP1AQ9HD42 196 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 FSCN3Q9NQT6 498 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC5A6Q9Y289 635 aa13.36□□□□□ -0.27
UBE2D4-201ENST00000222402 IGKV3D-11A0A0A0MRZ8 115 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 B8ZZF3 427 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 RER1O15258 196 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 FADS1O60427 444 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 LMX1BO60663 402 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 GABRR1P24046 479 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms