RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DEFB133Q30KQ1 61 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 MS4A18Q3C1V0 323 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 TMEM244Q5VVB8 128 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 MOB3CQ70IA8 216 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 LYG2Q86SG7 212 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 FAM46BQ96A09 425 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 PTX4Q96A99 478 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 MRGPRFQ96AM1 343 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 RAB22AQ9UL26 194 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 CPED1A4D0V7 1026 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 H3BMH7 237 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 RAB27BO00194 218 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 OR2T1O43869 369 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 H2BFMP0C1H6 154 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 RAB6AP20340 208 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 PHF19Q5T6S3 580 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 RHOUQ7L0Q8 258 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.41■□□□□ 0.06
USB1-201ENST00000219281 PAQR4Q8N4S7 273 aaPredicted RBP15.41■□□□□ 0.06
USB1-201ENST00000219281 NKAIN3Q8N8D7 197 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 CADM4Q8NFZ8 388 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 NUDCD2Q8WVJ2 157 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 FREM3P0C091 2139 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 FTCDNL1E5RQL4 147 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 NPIPA5E9PKD4 350 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 DCNP07585 359 aaKnown RBP15.41■□□□□ 0.06
USB1-201ENST00000219281 AVPR2P30518 371 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 GNALP38405 381 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 ARHGDIBP52566 201 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 DEFA5Q01523 94 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 OR52N4Q8NGI2 321 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 OR1N1Q8NGS0 311 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 ASB10Q8WXI3 467 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 FOXRED1Q96CU9 486 aaPredicted RBP15.41■□□□□ 0.06
USB1-201ENST00000219281 LRRC46Q96FV0 321 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 ZDHHC12Q96GR4 267 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 SLC2A8Q9NY64 477 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 NPIPA1Q9UND3 350 aa15.41■□□□□ 0.06
USB1-201ENST00000219281 CPAMD8Q8IZJ3 1885 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 ARID1BQ8NFD5 2236 aaPredicted RBP15.4■□□□□ 0.06
USB1-201ENST00000219281 C9orf170A2RU37 121 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 BDKRB2P30411 391 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 CD96P40200 585 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 IL13RA1P78552 427 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 UNC119Q13432 240 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 OR7A5Q15622 319 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 C1orf189Q5VU69 101 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 RAB12Q6IQ22 244 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 ZNF813Q6ZN06 617 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 OR2W3Q7Z3T1 314 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 BOLLQ8N9W6 283 aaKnown RBP15.4■□□□□ 0.06
USB1-201ENST00000219281 BPIFCQ8NFQ6 507 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 OR1L3Q8NH93 324 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 CASTOR1Q8WTX7 329 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 PMEPA1Q969W9 287 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 ARL5BQ96KC2 179 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 DNTTIP1Q9H147 329 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 MED29Q9NX70 200 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 KIF26BQ2KJY2 2108 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 SPAG17Q6Q759 2223 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 A6NIZ1 184 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 STK17BO94768 372 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 CNR1P21554 472 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 FBLP22087 321 aaKnown RBP15.4■□□□□ 0.06
USB1-201ENST00000219281 EIF1AXP47813 144 aaKnown RBP15.4■□□□□ 0.06
USB1-201ENST00000219281 STARD6P59095 220 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 RAP1BP61224 184 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 RAP1AP62834 184 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 DNM1P34Q6PK57 102 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 C16orf47Q6ZP98 133 aaPredicted RBP15.4■□□□□ 0.06
USB1-201ENST00000219281 ACOT7LQ6ZUV0 252 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 ADAD2Q8NCV1 583 aaKnown RBP15.4■□□□□ 0.06
USB1-201ENST00000219281 PTGES2Q9H7Z7 377 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 ZNF304Q9HCX3 659 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 MKL2Q9ULH7 1088 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 HRH3Q9Y5N1 445 aa15.4■□□□□ 0.06
USB1-201ENST00000219281 DNASE2O00115 360 aaPredicted RBP15.39■□□□□ 0.05
USB1-201ENST00000219281 GNB3P16520 340 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 HRH1P35367 487 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 CSNK1EP49674 416 aaKnown RBP15.39■□□□□ 0.05
USB1-201ENST00000219281 ARL4DP49703 201 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 PCK2Q16822 640 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 OGFOD3Q6PK18 319 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 LANCL3Q6ZV70 420 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 KCTD9Q7L273 389 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 TMEM185AQ8NFB2 350 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 MITD1Q8WV92 249 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 PHB2Q99623 299 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 CHRNA10Q9GZZ6 450 aa15.39■□□□□ 0.05
USB1-201ENST00000219281 LMO7DNF2Z398 122 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 KCNAB3O43448 404 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 PLATP00750 562 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 IL2RAP01589 272 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 ICAM2P13598 275 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 AKR1C4P17516 323 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 VAMP1P23763 118 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 FOXL2P58012 376 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 NXPH1P58417 271 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 MC2RQ01718 297 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 POU3F1Q03052 451 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms