RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C3orf33Q6P1S2 294 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 CD163Q86VB7 1156 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 TMEM17Q86X19 198 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 KDM8Q8N371 416 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 PAQR4Q8N4S7 273 aaPredicted RBP11.87□□□□□ -0.51
SRP54-201ENST00000216774 DTWD2Q8NBA8 298 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 PPP1R1CQ8WVI7 109 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 FGGYQ96C11 551 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 CST11Q9H112 138 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 MKL2Q9ULH7 1088 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 A0A1B0GX78 115 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 RNF222A6NCQ9 220 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 STK17BO94768 372 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 CSN2P05814 226 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 CNR1P21554 472 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 DLSTP36957 453 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 LUMP51884 338 aaPredicted RBP11.86□□□□□ -0.51
SRP54-201ENST00000216774 HSF1Q00613 529 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 UNC119Q13432 240 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 SQSTM1Q13501 440 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 OR7A5Q15622 319 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 PRAMEF17Q5VTA0 474 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 D2HGDHQ8N465 521 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 SMRP1Q8NCR6 262 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 OR1M1Q8NGA1 313 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 OR52H1Q8NGJ2 320 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 NKD1Q969G9 470 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 WDR13Q9H1Z4 485 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 CHST11Q9NPF2 352 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 KIF26BQ2KJY2 2108 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 LOC101059948A0A1B0GTJ6 334 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 TOR1AO14656 332 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 ZNF208O43345 1280 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 HNRNPKP61978 463 aaKnown RBP eCLIP11.86□□□□□ -0.51
SRP54-201ENST00000216774 IL13RA1P78552 427 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 POU3F1Q03052 451 aaPredicted RBP11.86□□□□□ -0.51
SRP54-201ENST00000216774 C17orf67Q0P5P2 114 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 ZNF529Q6P280 563 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 PLPP5Q8NEB5 264 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 TSTD1Q8NFU3 115 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 CHRDQ9H2X0 955 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 FANCFQ9NPI8 374 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 IFT46Q9NQC8 304 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 CENPMQ9NSP4 180 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 PISDQ9UG56 409 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 KNL1Q8NG31 2342 aa11.86□□□□□ -0.51
SRP54-201ENST00000216774 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 SYT7O43581 403 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 APOC3P02656 99 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 TTRP02766 147 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 ERCC1P07992 297 aaPredicted RBP11.85□□□□□ -0.51
SRP54-201ENST00000216774 FREM3P0C091 2139 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 GNALP38405 381 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 PRKXP51817 358 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 ATP1B3P54709 279 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 RNF4P78317 190 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 TLE3Q04726 772 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 FAM74A1Q5RGS3 127 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 KLHL24Q6TFL4 600 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 PLXDC1Q8IUK5 500 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 CCDC36Q8IYA8 594 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 CHST4Q8NCG5 386 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 OR52N4Q8NGI2 321 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 OR5D14Q8NGL3 314 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 THAP6Q8TBB0 222 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 DDIT4LQ96D03 193 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 SLAMF6Q96DU3 332 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 ARL5BQ96KC2 179 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 TAS2R3Q9NYW6 316 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 SLC5A6Q9Y289 635 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 IGHV1OR21-1A0A087WYE8 117 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 IGKV1D-43A0A0B4J1Z2 117 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 METTL12A8MUP2 240 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 C2CD4DB7Z1M9 353 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 CCSO14618 274 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 DUS4LO95620 317 aaKnown RBP11.85□□□□□ -0.51
SRP54-201ENST00000216774 DCNP07585 359 aaKnown RBP11.85□□□□□ -0.51
SRP54-201ENST00000216774 VSIG8P0DPA2 414 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 RAB3AP20336 220 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 OR1D5P58170 312 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 LRRC37A5PQ49AS3 106 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 PAN3Q58A45 887 aaKnown RBP11.85□□□□□ -0.51
SRP54-201ENST00000216774 CFAP77Q6ZQR2 320 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 WDFY1Q8IWB7 410 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 GVQW1Q8N7I0 195 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 INO80EQ8NBZ0 244 aaPredicted RBP11.85□□□□□ -0.51
SRP54-201ENST00000216774 OR10H5Q8NGA6 315 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 CMBLQ96DG6 245 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 ADAT3Q96EY9 351 aaPredicted RBP11.85□□□□□ -0.51
SRP54-201ENST00000216774 SEC22AQ96IW7 307 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 ZNF471Q9BX82 626 aaPredicted RBP11.85□□□□□ -0.51
SRP54-201ENST00000216774 PBOV1Q9GZY1 135 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 GAREM1Q9H706 876 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 KLHL13Q9P2N7 655 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 B3GALT5Q9Y2C3 310 aa11.85□□□□□ -0.51
SRP54-201ENST00000216774 TSPAN9O75954 239 aa11.84□□□□□ -0.51
SRP54-201ENST00000216774 GP1BAP07359 652 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms