RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 HTR2CP28335 458 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 GNALP38405 381 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 POU3F4P49335 361 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 CLDN18P56856 261 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 PPIAP62937 165 aaKnown RBP15.34■□□□□ 0.05
VRK1-201ENST00000216639 HIST1H3AP68431 136 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 DGCR2P98153 550 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 GPR176Q14439 515 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 BCL2A1Q16548 175 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 ELFN2Q5R3F8 820 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 RIPPLY2Q5TAB7 128 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 HIST2H3PS2Q5TEC6 136 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 HIST2H3AQ71DI3 136 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 VASH2Q86V25 355 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 LRRC18Q8N456 261 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 TMEM178AQ8NBL3 297 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 OR51D1Q8NGF3 324 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 OR5D14Q8NGL3 314 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 FGGYQ96C11 551 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 CRLF2Q9HC73 371 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 DIABLOQ9NR28 239 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 MCTS1Q9ULC4 181 aaKnown RBP15.34■□□□□ 0.05
VRK1-201ENST00000216639 N6AMT1Q9Y5N5 214 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 MED12Q93074 2177 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 TTC28Q96AY4 2481 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 MEIOCA2RUB1 952 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 GABARAPH6UMI1 98 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 CD37P11049 281 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 GALK2Q01415 458 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 SRYQ05066 204 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 CARTPTQ16568 116 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 FAM166AQ6J272 317 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 ABHD12BQ7Z5M8 362 aaPredicted RBP15.34■□□□□ 0.05
VRK1-201ENST00000216639 JAGN1Q8N5M9 183 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 ZFP62Q8NB50 900 aaPredicted RBP15.34■□□□□ 0.05
VRK1-201ENST00000216639 OR8B12Q8NGG6 310 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 OR51E1Q8TCB6 317 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 FCAMRQ8WWV6 532 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 SLC6A15Q9H2J7 730 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 EMC3Q9P0I2 261 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 NLKQ9UBE8 527 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 IGKV3D-15A0A087WSY6 115 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 ECDO95905 644 aaPredicted RBP15.33■□□□□ 0.04
VRK1-201ENST00000216639 ACTL6AO96019 429 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 ERCC1P07992 297 aaPredicted RBP15.33■□□□□ 0.04
VRK1-201ENST00000216639 CST2P09228 141 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 CDK2P24941 298 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 BDKRB2P30411 391 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 AP3S2P59780 193 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 SPOCK1Q08629 439 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 SLC10A1Q14973 349 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 C2orf76Q3KRA6 126 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 SLC36A2Q495M3 483 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 RNASE12Q5GAN4 147 aaKnown RBP15.33■□□□□ 0.04
VRK1-201ENST00000216639 ZNF766Q5HY98 468 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 ANKRD16Q6P6B7 361 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 DOK3Q7L591 496 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 PRSS45Q7RTY3 260 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 FAM109AQ8N4B1 249 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 ABHD3Q8WU67 409 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 SPTSSAQ969W0 71 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 SCMH1Q96GD3 660 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 PGAM5Q96HS1 289 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 SORCS2Q96PQ0 1159 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 PLEKHA1Q9HB21 404 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 ACKR4Q9NPB9 350 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 TMEM38BQ9NVV0 291 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 PARPBPQ9NWS1 579 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 PLEK2Q9NYT0 353 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 SLC5A6Q9Y289 635 aa15.33■□□□□ 0.04
VRK1-201ENST00000216639 NOSIPQ9Y314 301 aaKnown RBP15.33■□□□□ 0.04
VRK1-201ENST00000216639 A0A1B0GTI1 187 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 DCDC2BA2VCK2 349 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 NKX2-8O15522 239 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 XRCC3O43542 346 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 ORC5O43913 435 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 KRT33AO76009 404 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 FAM157BP0CG42 384 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 ARSBP15848 533 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 RAB3AP20336 220 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 DDOSTP39656 456 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 NOVA1P51513 510 aaKnown RBP15.32■□□□□ 0.04
VRK1-201ENST00000216639 TPTEP56180 551 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 DYRK1AQ13627 763 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 GLYATL3Q5SZD4 288 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 FAM57BQ71RH2 274 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 TMPRSS7Q7RTY8 843 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 OR1J2Q8NGS2 313 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 CREB3L1Q96BA8 519 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 PRRG4Q9BZD6 226 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 ZNF552Q9H707 407 aaPredicted RBP15.32■□□□□ 0.04
VRK1-201ENST00000216639 TMEM138Q9NPI0 162 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 AHCTF1Q8WYP5 2266 aa15.32■□□□□ 0.04
VRK1-201ENST00000216639 LOC390937A0A1W2PQ73 354 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 LMX1BO60663 402 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 MRPL33O75394 65 aaKnown RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 GSTT2BP0CG30 244 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 SLC2A1P11166 492 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 CCL1P22362 96 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 SLC6A1P30531 599 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms