RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SIRPB1O00241 398 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 Q56UQ5 140 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 SLC38A5Q8WUX1 472 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 RTP4Q96DX8 246 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 GPR173Q9NS66 373 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 SYT5O00445 386 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 NXNL2Q5VZ03 156 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 DPY19L2P2Q6ZN68 376 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 BCO1Q9HAY6 547 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 ADGRL4Q9HBW9 690 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 TAAR2Q9P1P5 351 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 RNF24Q9Y225 148 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 HTR6P50406 440 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 PIGPP57054 158 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 TRA2BP62995 288 aaKnown RBP13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 CAMKMTQ7Z624 323 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 CLMPQ9H6B4 373 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 M0R3E3 92 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 PSMB5P28074 263 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 HTR1DP28221 377 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 SSX1Q16384 188 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 PTDSS2Q9BVG9 487 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 SLCO1B1Q9Y6L6 691 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 FBLL1A6NHQ2 334 aaKnown RBP13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 CYC1P08574 325 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 FGF4P08620 206 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 EPHA2P29317 976 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 IRS1P35568 1242 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 UMODL1-AS1Q8N2C9 162 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 OR2J1Q9GZK6 312 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 RGPD5Q99666 1765 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 POLR2AP24928 1970 aaKnown RBP13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 GPX3P22352 226 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 RPL12P30050 165 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 C21orf58P58505 322 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 NPWQ8N729 165 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 TMEM178AQ8NBL3 297 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 LAMB4A4D0S4 1761 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 TUBAL3A6NHL2 446 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 PMP22Q01453 160 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 MED25Q71SY5 747 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 GPX7Q96SL4 187 aaPredicted RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 HES4Q9HCC6 221 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 GMPR2Q9P2T1 348 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 TRAV36DV7A0A075B6V5 113 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 CCDC187A0A096LP49 1063 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 ATP1B1P05026 303 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 SPCS3P61009 180 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 GPRIN1Q7Z2K8 1008 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 C19orf47Q8N9M1 422 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 TMEM37Q8WXS4 190 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 TAS2R4Q9NYW5 299 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 M0R1B8 84 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 BMP5P22003 454 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 HRH1P35367 487 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 OR10D4PQ8NGN7 298 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 C19orf43Q9BQ61 176 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 NTNG1Q9Y2I2 539 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 MS4A18H0YCH9 400 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 LRP3O75074 770 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 GPR75O95800 540 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 RACK1P63244 317 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 MS4A18Q3C1V0 323 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 Q6ZPB1 254 aaPredicted RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 DEFB108BQ8NET1 73 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 OR2D3Q8NGH3 330 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 POM121L2Q96KW2 1035 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 LSM2Q9Y333 95 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 GUSBP08236 651 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 PSMB6P28072 239 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 COL5A1-AS1Q5SY13 56 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 MOB3BQ86TA1 216 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 ZADH2Q8N4Q0 377 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 OR1L3Q8NH93 324 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 ARRDC2Q8TBH0 407 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 ATOH1Q92858 354 aaPredicted RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 NAT6Q93015 286 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 C12orf42Q96LP6 360 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 CD207Q9UJ71 328 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 ALPLP05186 524 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 GNG4P50150 75 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 CMPK2Q5EBM0 449 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 CIB3Q96Q77 187 aaPredicted RBP13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 PRO1933Q9H354 126 aa13.38□□□□□ -0.27
SPTLC2-201ENST00000216484 A0A0U1RQS6 177 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 FITM1A5D6W6 292 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 SOX18P35713 384 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 RPL29P47914 159 aaKnown RBP13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 LHFPL2Q6ZUX7 228 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 CLDN22Q8N7P3 220 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 PFN4Q8NHR9 129 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 SLC39A13Q96H72 371 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 RNF2Q99496 336 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 CLLU1Q5K131 121 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 TMEM255BQ8WV15 326 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 NRG4Q8WWG1 115 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
SPTLC2-201ENST00000216484 TMED7-TICAM2A0A0A6YYA0 188 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms