RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 CslQ80X68 466 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr70Q80ZX9 316 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gpr137bQ8BNQ3 385 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tssk5Q8C1R0 372 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r81Q8R286 306 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Pdzd11Q9CZG9 140 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rnf32Q9JIT1 368 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1496B9EHG2 317 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn2r89O35199 507 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 GsrP47791 500 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Hsf5Q5ND04 624 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Smim4Q8C1Q6 80 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 PsphQ99LS3 225 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ca13Q9D6N1 262 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Syt9Q9R0N9 491 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr39E9PVX1 319 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn2r117K7N6V1 857 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfand5O88878 213 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 MbpP04370 250 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Mcpt2P15119 244 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gnb1P62874 340 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sumo1P63166 101 aaKnown RBP11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Dlx4P70436 240 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Pdlim7Q3TJD7 457 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gramd2aQ3V3G7 320 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Flvcr2Q91X85 551 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 BC048679D3YXE9 172 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Smad6O35182 495 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 BatfO35284 125 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 RorcP51450 516 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Acod1P54987 488 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 SpicQ6P3D7 242 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gtdc1Q8BW56 445 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 RydenQ8CAK3 290 aaKnown RBP11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cys1Q8R4T1 145 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 RfxapQ8VCG9 231 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ceacam18Q9D871 376 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sema7aQ9QUR8 664 aa11.02□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr248E9Q1L6 309 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Il5raP21183 415 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Limk1P53668 647 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 C1qtnf6Q6IR41 264 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 PcnpQ6P8I4 178 aaKnown RBP11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Timm29Q8BGX2 266 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr648Q8VG19 316 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Dnmt3lQ9CWR8 421 aaKnown RBP11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q9D1Z2 194 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Il23aQ9EQ14 196 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr896-ps1A0A1L1SRZ8 308 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1107A2AVB8 312 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn2r16E9Q025 850 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Btbd35f30J3QML3 498 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Btbd35f22J3QN64 498 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Eif1P48024 113 aaKnown RBP11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Med19Q8C1S0 244 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ubqln3Q8C5U9 658 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr830Q8VFJ5 315 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr160Q8VGE3 309 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cysltr2Q920A1 309 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 NosipQ9D6T0 301 aaKnown RBP11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1338A2ACY7 313 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm765B2RVL9 189 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 CycsP62897 105 aaKnown RBP11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Barhl1P63157 327 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vezf1Q5SXC4 518 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 ZpbpQ62522 350 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 AstlQ6HA09 435 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mettl20Q80ZM3 255 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Pxylp1Q8BHA9 480 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 6030452D12RikQ8CD33 222 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nsun5Q8K4F6 465 aaKnown RBP11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1263Q8VG63 306 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 2200002D01RikQ9D809 114 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cacna1sQ02789 1880 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp300A2AE21 645 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm11758A2BEI6 360 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm11757A2BEI8 360 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cldn34b4Q3V0X2 211 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Prss36Q5K2P8 849 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Trp53rkaQ5U452 244 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mea1Q64327 174 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zic5Q7TQ40 622 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 DrgxQ8BYH0 263 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr113Q8VEU4 312 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tp53rkQ99PW4 244 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr655E9Q252 308 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm21812J3QN84 227 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Pcsk4P29121 655 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 InhbcP55104 352 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 Kcng3P59053 433 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 March9Q3TZ87 348 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 ApoolQ78IK4 265 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 StradbQ8K4T3 418 aa11.02□□□□□ -0.65
Trim56-201ENSMUST00000054384 RfngO09009 332 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Klk1P15947 261 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Agbl5Q09M02 886 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Samd8Q9DA37 478 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn2r96E9PZU5 664 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Matn3O35701 481 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1428Q0VDY1 314 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 135 ms