RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Xkr8Q8C0T0 401 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Vmn1r32Q8R2D9 302 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr771Q8VFH6 317 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Itgb3bpQ9CQ82 176 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Mettl18Q9CZ09 362 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tex29Q9DA77 186 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Eif2s3xQ9Z0N1 472 aaKnown RBP7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rgs6Q9Z2H2 472 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 PoleQ9WVF7 2283 aa7.76□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm13078A2AGW8 474 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ccnb1ip1D3Z3K2 276 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm21897J3KMP5 500 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr597L7N224 315 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Raet1aO08602 253 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Raet1bO08603 253 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 P2rx6O54803 389 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cd83O88324 196 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cfl1P18760 166 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cdc25bP30306 576 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cpt2P52825 658 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Atp5j2P56135 88 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rap1aP62835 184 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Jmjd8Q3TA59 316 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr145Q60882 310 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Sqstm1Q64337 442 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Svs6Q64356 99 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gadl1Q80WP8 550 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tmem255aQ8BHW5 351 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Dlgap2Q8BJ42 1059 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ubald2Q8BQH4 164 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Lacc1Q8BZT9 430 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Peli1Q8C669 418 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Vmn1r183Q8K3N5 305 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Slc22a22Q8R0S9 554 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1277Q8VF41 303 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1226Q8VGM5 310 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1052Q8VGR8 312 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Dcp1aQ91YD3 602 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cd209dQ91ZW8 237 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rap1bQ99JI6 184 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fam122cQ9D5J5 180 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Cryba2Q9JJV1 197 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Kcnj16Q9Z307 419 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp292Q9Z2U2 2698 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Nup214Q80U93 2085 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm16432A0A0A6YXX9 775 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Aadacl3A2A7Z8 408 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp712E9PXJ4 705 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fcn1O70165 334 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Il1r1P13504 576 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Nme1P15532 152 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 PpibP24369 216 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ccl9P51670 122 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Nos3P70313 1202 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Foxr2Q3UM89 302 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Polr2mQ6P6I6 366 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Scgb1c1Q7M742 95 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Thoc7Q7TMY4 204 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr17Q7TRM9 315 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Arf2Q8BSL7 181 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Lrfn5Q8BXA0 719 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Babam2Q8K3W0 383 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ocel1Q8VCR9 219 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Idh3bQ91VA7 384 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Lrch4Q921G6 680 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ddb2Q99J79 432 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tceal6Q9DB24 200 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Alg2Q9DBE8 415 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tmem27Q9ESG4 222 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Skint10A7TZG1 354 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Tmem92B7ZWI3 162 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Scgb2b3D2XZ38 112 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gm9920D3YVZ2 140 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr287E9PZS7 322 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 CaskO70589 926 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Stc2O88452 296 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Creg1O88668 220 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 ApelaP0DMC4 54 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Sox7P40646 380 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Efnb1P52795 345 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Crabp1P62965 137 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Gpr143P70259 405 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Scn1bP97952 218 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 4930480E11RikQ0VG34 394 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Amz2Q400C8 359 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Fbxw20Q5U467 468 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Zfp180Q6NZI9 655 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Trim45Q6PFY8 580 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Olfr1287Q7TQY1 305 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Stk35Q80ZW0 539 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 SowahbQ8BZW2 760 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rdh10Q8VCH7 341 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Slc7a12Q8VIE6 465 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Dimt1Q9D0D4 313 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Mrto4Q9D0I8 239 aaKnown RBP7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Rnf128Q9D304 428 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 2200002D01RikQ9D809 114 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Ceacam13Q9DAT7 263 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 FcrlsQ9EQY5 509 aa7.75□□□□□ -1.17
Trim39-201ENSMUST00000042717 Reep6Q9JM62 201 aa7.75□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms