RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 CHMP1AQ9HD42 196 aaPredicted RBP12.27□□□□□ -0.44
PAX6-280ENST00000640872 ACKR4Q9NPB9 350 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 MMP26Q9NRE1 261 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 GDF2Q9UK05 429 aaPredicted RBP12.27□□□□□ -0.44
PAX6-280ENST00000640872 LHX6Q9UPM6 363 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 RAB27BO00194 218 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 DUS4LO95620 317 aaKnown RBP12.27□□□□□ -0.45
PAX6-280ENST00000640872 APOC1P02654 83 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 ERCC1P07992 297 aaPredicted RBP12.27□□□□□ -0.45
PAX6-280ENST00000640872 FAM157CP0CG43 387 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 SPP1P10451 314 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 HPGDP15428 266 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 CENPAP49450 140 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 INSM1Q01101 510 aaPredicted RBP12.27□□□□□ -0.45
PAX6-280ENST00000640872 MST1LQ2TV78 715 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 KCTD18Q6PI47 426 aaPredicted RBP12.27□□□□□ -0.45
PAX6-280ENST00000640872 KCTD9Q7L273 389 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 SFTPA2Q8IWL1 248 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 GVQW1Q8N7I0 195 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 OR4D6Q8NGJ1 314 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 ZNF519Q8TB69 540 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 DCUN1D4Q92564 292 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 ZC3H10Q96K80 434 aaKnown RBP12.27□□□□□ -0.45
PAX6-280ENST00000640872 ABHD6Q9BV23 337 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 S1PR5Q9H228 398 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 FN3KRPQ9HA64 309 aa12.27□□□□□ -0.45
PAX6-280ENST00000640872 MEX3AA1L020 520 aaKnown RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 PRSS44E7EML9 344 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 C11orf98E9PRG8 122 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 SCDO00767 359 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 CRYBA1P05813 215 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 ST6GAL1P15907 406 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 ABOP16442 354 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 MAOAP21397 527 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 VAMP1P23763 118 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 DNASE1L1P49184 302 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 SLC22A6Q4U2R8 563 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 NKAPLQ5M9Q1 402 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 YAF2Q8IY57 180 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 ZNF563Q8TA94 476 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 TMED6Q8WW62 240 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 OIT3Q8WWZ8 545 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 CMSS1Q9BQ75 279 aaKnown RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 RNF126Q9BV68 326 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 UQCC1Q9NVA1 299 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 MRPS33Q9Y291 106 aaKnown RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 ALPK2Q86TB3 2170 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 LINC01387J3KSC0 135 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 SLC16A7O60669 478 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 OR6A2O95222 327 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 PLGP00747 810 aaPredicted RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 CTLA4P16410 223 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 SERPINF1P36955 418 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 KCNJ3P48549 501 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 EIF2B1Q14232 305 aaKnown RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 ACKR1Q16570 336 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 AVPI1Q5T686 147 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 COL13A1Q5TAT6 717 aaPredicted RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 C1QL3Q5VWW1 255 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 CHRDL2Q6WN34 429 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 IL34Q6ZMJ4 242 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 FAM160A2Q8N612 972 aaPredicted RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 OR13C3Q8NGS6 347 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 RXFP4Q8TDU9 374 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 ELP5Q8TE02 316 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 METTL21AQ8WXB1 218 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 CMBLQ96DG6 245 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 DNAJA3Q96EY1 480 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 NMES1Q9C002 83 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 TMEM231Q9H6L2 316 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 VSX1Q9NZR4 365 aaPredicted RBP12.26□□□□□ -0.45
PAX6-280ENST00000640872 PRODH2Q9UF12 536 aa12.26□□□□□ -0.45
PAX6-280ENST00000640872 A0A0B4J2A0 478 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 LOC107986453A0A1B0GWG9 222 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 H0YIZ8 118 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 TNFRSF10CO14798 259 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 LMX1BO60663 402 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 UTS2O95399 124 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 IL33O95760 270 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 IFNA4P05014 189 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 HRH1P35367 487 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 NR0B1P51843 470 aaKnown RBP12.25□□□□□ -0.45
PAX6-280ENST00000640872 RPL27P61353 136 aaKnown RBP12.25□□□□□ -0.45
PAX6-280ENST00000640872 PJVKQ0ZLH3 352 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 HYAL1Q12794 435 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 AIMP2Q13155 320 aaKnown RBP12.25□□□□□ -0.45
PAX6-280ENST00000640872 PRTGQ2VWP7 1150 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 TMEM196Q5HYL7 178 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 DRAM2Q6UX65 266 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 TMPPEQ6ZT21 453 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 PARGQ86W56 976 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 NKAIN3Q8N8D7 197 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 ZSCAN4Q8NAM6 433 aaPredicted RBP12.25□□□□□ -0.45
PAX6-280ENST00000640872 OR52N5Q8NH56 324 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 SFT2D1Q8WV19 159 aa12.25□□□□□ -0.45
PAX6-280ENST00000640872 NKD1Q969G9 470 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms