RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 LINC00476Q8WZB0 136 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 FAF2Q96CS3 445 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 CELF6Q96J87 481 aaKnown RBP6.2□□□□□ -1.42
NECAP1-220ENST00000639841 C17orf77Q96MU5 243 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 RNF2Q99496 336 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 KLF6Q99612 283 aaPredicted RBP6.2□□□□□ -1.42
NECAP1-220ENST00000639841 SSBP3Q9BWW4 388 aaPredicted RBP6.2□□□□□ -1.42
NECAP1-220ENST00000639841 TSGA10Q9BZW7 698 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 ZYG11BQ9C0D3 744 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 MMP28Q9H239 520 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.2□□□□□ -1.42
NECAP1-220ENST00000639841 FAF1Q9UNN5 650 aaPredicted RBP6.2□□□□□ -1.42
NECAP1-220ENST00000639841 SCN8AQ9UQD0 1980 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 HECTD1Q9ULT8 2610 aa6.2□□□□□ -1.42
NECAP1-220ENST00000639841 A0A1W2PRF3 423 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 A0A1W2PRM7 423 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 PRMT5O14744 637 aaPredicted RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 TSPAN15O95858 294 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 PAK4O96013 591 aaPredicted RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 RPLP0P05388 317 aaKnown RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 CTSLP07711 333 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 EFNA1P20827 205 aaPredicted RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 ATP5A1P25705 553 aaKnown RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 COILP38432 576 aaPredicted RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 PRLHRP49683 370 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 SERPINB9P50453 376 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 VSNL1P62760 191 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 LTBQ06643 244 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 RIPPLY1Q0D2K3 151 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 ZNF155Q12901 538 aaPredicted RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 TPBGQ13641 420 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 LAGE3Q14657 143 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 C14orf28Q4W4Y0 310 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 FNBP1LQ5T0N5 605 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 SYPL2Q5VXT5 272 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 ADAMTSL5Q6ZMM2 481 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 NUFIP2Q7Z417 695 aaKnown RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 DEFB106AQ8N104 65 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 OR1S2Q8NGQ3 325 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 OR6N2Q8NGY6 317 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 EXTL1Q92935 676 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 TADA1Q96BN2 335 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 URB1-AS1Q96HZ7 61 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 PSMB7Q99436 277 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 ZNF670Q9BS34 389 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 RSG1Q9BU20 258 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 B4GALT7Q9UBV7 327 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 ELF5Q9UKW6 265 aaPredicted RBP6.19□□□□□ -1.42
NECAP1-220ENST00000639841 AUP1Q9Y679 476 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 FREM2Q5SZK8 3169 aa6.19□□□□□ -1.42
NECAP1-220ENST00000639841 GOLGA6L10A6NI86 522 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 LRRN3E7EW58 273 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 H3BMQ9 156 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 CLDN34H7C241 214 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ESRRBO95718 433 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 IGHV4-30-4P0DP06 118 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 BCKDHAP12694 445 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 HLA-DOBP13765 273 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 HOXD3P31249 432 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 AP3S2P59780 193 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 REEP5Q00765 189 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ID2Q02363 134 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 GNA12Q03113 381 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 C2orf80Q0P641 193 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ZNF169Q14929 603 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ODF3L2Q3SX64 289 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 CERS6Q6ZMG9 384 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 PIM3Q86V86 326 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 OR4N5Q8IXE1 308 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ZSCAN4Q8NAM6 433 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 RANBP9Q96S59 729 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ATP13A3Q9H7F0 1226 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 NHEJ1Q9H9Q4 299 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 PATZ1Q9HBE1 687 aaKnown RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 FZD3Q9NPG1 666 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 RCL1Q9Y2P8 373 aaKnown RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 DHRS7Q9Y394 339 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 A0A1W2PNU3 283 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 TSPAN11A1L157 253 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 IGLON5A6NGN9 336 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 SGCEO43556 437 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 OR7A10O76100 309 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 LSM8O95777 96 aaKnown RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 PCK1P35558 622 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 VHLP40337 213 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 MAGEA2P43356 314 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 KIR3DL2P43630 455 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 GNG10P50151 68 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 XKP51811 444 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 RPS13P62277 151 aaKnown RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 CCL7P80098 99 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 MRPS22P82650 360 aaKnown RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ZNF33BQ06732 778 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 SCRN3Q0VDG4 424 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 ZNF672Q499Z4 452 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 FAHD2BQ6P2I3 314 aaPredicted RBP6.18□□□□□ -1.42
NECAP1-220ENST00000639841 GDPD4Q6W3E5 623 aa6.18□□□□□ -1.42
NECAP1-220ENST00000639841 TIPARPQ7Z3E1 657 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms