RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PTP4A1Q93096 173 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 CMBLQ96DG6 245 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 PITX2Q99697 317 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 COQ7Q99807 217 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 TSSK6Q9BXA6 273 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 HDHD2Q9H0R4 259 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 POFUT1Q9H488 388 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 MSL2Q9HCI7 577 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 ATPIF1Q9UII2 106 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 ZDHHC8Q9ULC8 765 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 LHFPL6Q9Y693 200 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 ZSCAN5BA6NJL1 495 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 B4DSR2 109 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 CLDN25C9JDP6 229 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 GNGT2O14610 69 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 UBOX5O94941 541 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 CST1P01037 141 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 TFP02787 698 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 DBHP09172 617 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 SRD5A1P18405 259 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 PYCR1P32322 319 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 CR1LQ2VPA4 569 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 TMEM255AQ5JRV8 349 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 ZNF770Q6IQ21 691 aaPredicted RBP11.74□□□□□ -0.53
PNKP-228ENST00000637325 IL17RELQ6ZVW7 336 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 CYB561A3Q8NBI2 242 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 PROKR2Q8NFJ6 384 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 OR2T4Q8NH00 348 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 CCL17Q92583 94 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 RAB1CQ92928 201 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 CHID1Q9BWS9 393 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 PLA2G12AQ9BZM1 189 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 VNN3Q9NY84 501 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 FAM53CQ9NYF3 392 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 IL20Q9NYY1 176 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 TREM2Q9NZC2 230 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 PTTG3PQ9NZH4 202 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 KLHL21Q9UJP4 597 aa11.74□□□□□ -0.53
PNKP-228ENST00000637325 PURGQ9UJV8 347 aaKnown RBP11.74□□□□□ -0.53
PNKP-228ENST00000637325 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 AQP12BA6NM10 295 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 BHLHE40O14503 412 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 KITLGP21583 273 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 PCMT1P22061 227 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 HIST1H3AP68431 136 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 TNFAIP6P98066 277 aaPredicted RBP11.73□□□□□ -0.53
PNKP-228ENST00000637325 SLC3A1Q07837 685 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 DBPQ10586 325 aaPredicted RBP11.73□□□□□ -0.53
PNKP-228ENST00000637325 COX10Q12887 443 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 ECH1Q13011 328 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 GK3PQ14409 553 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 HIST2H3PS2Q5TEC6 136 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 SLC18B1Q6NT16 456 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 HIST2H3AQ71DI3 136 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 PEG10Q86TG7 708 aaKnown RBP11.73□□□□□ -0.53
PNKP-228ENST00000637325 AQP12AQ8IXF9 295 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 OR2Z1Q8NG97 314 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 OR10G2Q8NGC3 310 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 GIPC3Q8TF64 312 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 APOBEC3DQ96AK3 386 aaPredicted RBP11.73□□□□□ -0.53
PNKP-228ENST00000637325 HAVCR1Q96D42 359 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 DGCR6LQ9BY27 220 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 LPAR2Q9HBW0 351 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 TMEFF2Q9UIK5 374 aaPredicted RBP11.73□□□□□ -0.53
PNKP-228ENST00000637325 KCNG2Q9UJ96 466 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 BAIAP2Q9UQB8 552 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 CACNG2Q9Y698 323 aa11.73□□□□□ -0.53
PNKP-228ENST00000637325 DHRS12A0PJE2 317 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 F5H5K5 113 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 J3QW42 95 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 ACOT8O14734 319 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 WNT9BO14905 357 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 SOX14O95416 240 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 IFNGP01579 166 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 CD55P08174 381 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 ADH4P08319 380 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 RAC2P15153 192 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 DVL1P1P54792 670 aaPredicted RBP11.72□□□□□ -0.53
PNKP-228ENST00000637325 CDK5R2Q13319 367 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 CFAP77Q6ZQR2 320 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 GLCCI1Q86VQ1 547 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 SPATA24Q86W54 205 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 ADGRG5Q8IZF4 528 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 OR5AS1Q8N127 324 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 LNX2Q8N448 690 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 SLC37A3Q8NCC5 494 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 OR2T33Q8NG76 320 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 OR8D4Q8NGM9 314 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 TEX47Q8TBZ9 253 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 ATF6BQ99941 703 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 ARMC1Q9NVT9 282 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 CYB5R1Q9UHQ9 305 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 WIPI2Q9Y4P8 454 aa11.72□□□□□ -0.53
PNKP-228ENST00000637325 ISPDA4D126 451 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 TVP23AA6NH52 213 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 FAM157AC9JC47 383 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 H3BN98 237 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms